RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ORC4O43929 436 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 FGRP09769 529 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 SNAP25P60880 206 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 NUCB1Q02818 461 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 NMIQ13287 307 aaPredicted RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 ALX1Q15699 326 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 MCMDC2Q4G0Z9 681 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 SH3RF1Q7Z6J0 888 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 ZNF589Q86UQ0 364 aaPredicted RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 FAM160B2Q86V87 743 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 DEFB123Q8N688 67 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 AGBL1Q96MI9 1066 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 LRRC37A2A6NM11 1700 aa17.94■□□□□ 0.46
TGFB1-202ENST00000597453 LAMA2P24043 3122 aaKnown RBP17.94■□□□□ 0.46
TGFB1-202ENST00000597453 A0A1W2PQ45 241 aaPredicted RBP17.93■□□□□ 0.46
TGFB1-202ENST00000597453 A0A1W2PQY0 241 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 TRIM43BA6NCK2 446 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 MYADML2A6NDP7 307 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 ADCY6O43306 1168 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 FGAP02671 866 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 FDX1P10109 184 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 NOVP48745 357 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 IRX5P78411 483 aaPredicted RBP17.93■□□□□ 0.46
TGFB1-202ENST00000597453 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 TLE2Q04725 743 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 CHURC1Q8WUH1 139 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 TRIM43Q96BQ3 446 aaPredicted RBP17.93■□□□□ 0.46
TGFB1-202ENST00000597453 ACAD9Q9H845 621 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 RNF146Q9NTX7 359 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 MTMR7Q9Y216 660 aa17.93■□□□□ 0.46
TGFB1-202ENST00000597453 HSPD1P10809 573 aaKnown RBP17.92■□□□□ 0.46
TGFB1-202ENST00000597453 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 RCSD1Q6JBY9 416 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 CCDC174Q6PII3 467 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 ARMCX2Q7L311 632 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 KLHDC9Q8NEP7 349 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 BADQ92934 168 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 A1CFQ9NQ94 594 aaKnown RBP17.92■□□□□ 0.46
TGFB1-202ENST00000597453 PRR12Q9ULL5 1215 aa17.92■□□□□ 0.46
TGFB1-202ENST00000597453 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 PLA2G6O60733 806 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 ITGB8P26012 769 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 ACLYP53396 1101 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
TGFB1-202ENST00000597453 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
TGFB1-202ENST00000597453 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 FAM133AQ8N9E0 248 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 LAMA4Q16363 1823 aa17.91■□□□□ 0.46
TGFB1-202ENST00000597453 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 PQBP1O60828 265 aaKnown RBP17.9■□□□□ 0.46
TGFB1-202ENST00000597453 DUSP11O75319 330 aaKnown RBP17.9■□□□□ 0.46
TGFB1-202ENST00000597453 ALAS1P13196 640 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 HAND2P61296 217 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 SHHQ15465 462 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 KCNA10Q16322 511 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 CCDC144BQ3MJ40 725 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 C9orf50Q5SZB4 431 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 TTBK2Q6IQ55 1244 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 TICAM2Q86XR7 235 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 RILPL2Q969X0 211 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 TRERF1Q96PN7 1200 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 TSEN34Q9BSV6 310 aaKnown RBP17.9■□□□□ 0.46
TGFB1-202ENST00000597453 ABHD16BQ9H3Z7 469 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 ASTN1O14525 1302 aa17.9■□□□□ 0.46
TGFB1-202ENST00000597453 CLTBP09497 229 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 CCDC96Q2M329 555 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 TKFCQ3LXA3 575 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 MUM1L1Q5H9M0 696 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 DCAF4Q8WV16 495 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 TMEM47Q9BQJ4 181 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 STARD7Q9NQZ5 370 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 MTMR10Q9NXD2 777 aa17.89■□□□□ 0.45
TGFB1-202ENST00000597453 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
TGFB1-202ENST00000597453 MOXD2PA6NHM9 499 aa17.88■□□□□ 0.45
TGFB1-202ENST00000597453 C6orf222P0C671 652 aaPredicted RBP17.88■□□□□ 0.45
TGFB1-202ENST00000597453 TOP1P11387 765 aaKnown RBP17.88■□□□□ 0.45
TGFB1-202ENST00000597453 SDSP20132 328 aa17.88■□□□□ 0.45
TGFB1-202ENST00000597453 CST5P28325 142 aaPredicted RBP17.88■□□□□ 0.45
TGFB1-202ENST00000597453 SLC16A2P36021 539 aa17.88■□□□□ 0.45
TGFB1-202ENST00000597453 TBC1D10CQ8IV04 446 aa17.88■□□□□ 0.45
TGFB1-202ENST00000597453 UPF3AQ9H1J1 476 aaKnown RBP17.88■□□□□ 0.45
TGFB1-202ENST00000597453 FRMPD2Q68DX3 1309 aaPredicted RBP17.88■□□□□ 0.45
TGFB1-202ENST00000597453 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.87■□□□□ 0.45
TGFB1-202ENST00000597453 KIAA0355O15063 1070 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 CTAGE5O15320 804 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 GJA9P57773 515 aa17.87■□□□□ 0.45
TGFB1-202ENST00000597453 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms