RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 PDCP20941 246 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 SYT1P21579 422 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 CDC27P30260 824 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.61
KDM4B-209ENST00000592159 SHMT1P34896 483 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
KDM4B-209ENST00000592159 HERVK_113P62684 666 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 GABPAQ06546 454 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 CACNB2Q08289 660 aaPredicted RBP11.27□□□□□ -0.61
KDM4B-209ENST00000592159 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 SOCS4Q8WXH5 440 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
KDM4B-209ENST00000592159 EHD4Q9H223 541 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 IL17RBQ9NRM6 502 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 KIF3AQ9Y496 699 aa11.27□□□□□ -0.61
KDM4B-209ENST00000592159 H3BQV1 296 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 CDKL5O76039 1030 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 CALM1P0DP23 149 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 CALM2P0DP24 149 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 CALM3P0DP25 149 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 RGS2P41220 211 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
KDM4B-209ENST00000592159 HMGN5P82970 282 aaKnown RBP11.26□□□□□ -0.61
KDM4B-209ENST00000592159 NBR1Q14596 966 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 Q3C1V9 767 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 DGKHQ86XP1 1220 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 SMARCC2Q8TAQ2 1214 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 TCP11L1Q9NUJ3 509 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
KDM4B-209ENST00000592159 RBPJLQ9UBG7 517 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 STX8Q9UNK0 236 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
KDM4B-209ENST00000592159 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 CCDC196A0A1B0GTZ2 297 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 DDAH1O94760 285 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 BRD1O95696 1058 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 CNGA1P29973 690 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 ERVK-9P63128 1117 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 ERVK-24P63145 666 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 JAG1P78504 1218 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 CERKLQ49MI3 558 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 RCSD1Q6JBY9 416 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 POTEHQ6S545 545 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 LBHD1Q9BQE6 289 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 TXNRD2Q9NNW7 524 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 MTMR10Q9NXD2 777 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 STXBP5LQ9Y2K9 1186 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 MYH8P13535 1937 aa11.25□□□□□ -0.61
KDM4B-209ENST00000592159 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
KDM4B-209ENST00000592159 ATAD5Q96QE3 1844 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CCND3P30281 292 aaPredicted RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 RCAN1P53805 252 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CCNA1P78396 465 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 ZYXQ15942 572 aaKnown RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CCL14Q16627 93 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 GPR142Q7Z601 462 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CMTR1Q8N1G2 835 aaKnown RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 PNMA1Q8ND90 353 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 PHKBQ93100 1093 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CEP95Q96GE4 821 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 CCDC17Q96LX7 622 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 FEZ1Q99689 392 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 SLC26A6Q9BXS9 759 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 SENP6Q9GZR1 1112 aaPredicted RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 PORCNQ9H237 461 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
KDM4B-209ENST00000592159 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 RBM28Q9NW13 759 aaKnown RBP11.24□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
KDM4B-209ENST00000592159 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms