RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
MBD1-225ENST00000591535 DOCK3Q8IZD9 2030 aa16.4■□□□□ 0.22
MBD1-225ENST00000591535 GNAQP50148 359 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 NEK4P51957 841 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 SHCBP1Q8NEM2 672 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 SRRDQ9UH36 339 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 CCPG1Q9ULG6 757 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
MBD1-225ENST00000591535 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 GOLGA8BA8MQT2 603 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 ICAM1P05362 532 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 ALAS1P13196 640 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 COPB2P35606 906 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 PRKCZQ05513 592 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 CDC37Q16543 378 aaPredicted RBP16.38■□□□□ 0.21
MBD1-225ENST00000591535 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
MBD1-225ENST00000591535 JMJD4Q9H9V9 463 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 GABRQQ9UN88 632 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 MYH6P13533 1939 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
MBD1-225ENST00000591535 ZNF536O15090 1300 aa16.38■□□□□ 0.21
MBD1-225ENST00000591535 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
MBD1-225ENST00000591535 FLT3LGP49771 235 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
MBD1-225ENST00000591535 PRMT2P55345 433 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 TOB2Q14106 344 aaPredicted RBP16.37■□□□□ 0.21
MBD1-225ENST00000591535 PKN2Q16513 984 aaKnown RBP16.37■□□□□ 0.21
MBD1-225ENST00000591535 RTN1Q16799 776 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 NBPF11Q86T75 865 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 CMTR1Q8N1G2 835 aaKnown RBP16.37■□□□□ 0.21
MBD1-225ENST00000591535 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 AGXT2Q9BYV1 514 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 STRNO43815 780 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 PLEKHA8P1O95397 391 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 FCER1AP12319 257 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 PTPREP23469 700 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 USH1GQ495M9 461 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
MBD1-225ENST00000591535 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 CENPFP49454 3210 aa16.37■□□□□ 0.21
MBD1-225ENST00000591535 PLXNB2O15031 1838 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 SLC15A5A6NIM6 579 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 CYP2B6P20813 491 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 KCTD2Q14681 263 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 ANKRD1Q15327 319 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
MBD1-225ENST00000591535 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 SOCS4Q8WXH5 440 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 PIGSQ96S52 555 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 MMP19Q99542 508 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 MCOLN1Q9GZU1 580 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 FBXO40Q9UH90 709 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 PTCH2Q9Y6C5 1203 aa16.36■□□□□ 0.21
MBD1-225ENST00000591535 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 ZBTB5O15062 677 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 RCAN1P53805 252 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 AK2P54819 239 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 TKFCQ3LXA3 575 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 FBXO11Q86XK2 927 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 SEC63Q9UGP8 760 aaKnown RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
MBD1-225ENST00000591535 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 HTTP42858 3142 aa16.35■□□□□ 0.21
MBD1-225ENST00000591535 CYTH3O43739 400 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 SMARCA1P28370 1054 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 ADORA2AP29274 412 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 RGS2P41220 211 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 CCT2P78371 535 aaKnown RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 STK3Q13188 491 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 PPP2R5BQ15173 497 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 MORN1Q5T089 497 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 AMNQ9BXJ7 453 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 ALDH8A1Q9H2A2 487 aaPredicted RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 EVCP57679 992 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms