RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 CCDC122Q5T0U0 273 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 CRNKL1Q9BZJ0 848 aaKnown RBP17.13■□□□□ 0.33
SAFB-205ENST00000588852 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 FBXO33Q7Z6M2 555 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
SAFB-205ENST00000588852 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
SAFB-205ENST00000588852 RIN2Q8WYP3 895 aaPredicted RBP17.13■□□□□ 0.33
SAFB-205ENST00000588852 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 VGLL3A8MV65 326 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 ORC4O43929 436 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 UBA7P41226 1012 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 USP5P45974 858 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 ZNF507Q8TCN5 953 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 PLEKP08567 350 aaPredicted RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 STK4Q13043 487 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 SAP30BPQ9UHR5 308 aaKnown RBP17.12■□□□□ 0.33
SAFB-205ENST00000588852 DOT1LQ8TEK3 1739 aa17.12■□□□□ 0.33
SAFB-205ENST00000588852 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 H7C1D1 291 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 TXLNBQ8N3L3 684 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 LGALS16A8MUM7 142 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 SPAG1Q07617 926 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
SAFB-205ENST00000588852 VAT1LQ9HCJ6 419 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 TRIM66O15016 1216 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
SAFB-205ENST00000588852 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 LINC00116Q8NCU8 138 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
SAFB-205ENST00000588852 PCMTD1Q96MG8 357 aaPredicted RBP17.11■□□□□ 0.33
SAFB-205ENST00000588852 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
SAFB-205ENST00000588852 PLCG1P19174 1290 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 TRIM21P19474 475 aaKnown RBP17.1■□□□□ 0.33
SAFB-205ENST00000588852 FAM193AP78312 1265 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
SAFB-205ENST00000588852 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 TTI2Q6NXR4 508 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 ANKRD65E5RJM6 399 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 M0R2N6 131 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 PDE2AO00408 941 aaPredicted RBP17.1■□□□□ 0.33
SAFB-205ENST00000588852 MYBL2P10244 700 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 GPS2Q13227 327 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 WHAMMP3Q1A5X7 153 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
SAFB-205ENST00000588852 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 PSMB7Q99436 277 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
SAFB-205ENST00000588852 A0A1B0GUL6 1792 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 TULP2O00295 520 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 ERLIN1O75477 346 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 KIF5BP33176 963 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 TECP42680 631 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 TBC1D8BQ0IIM8 1120 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
SAFB-205ENST00000588852 TGFBRAP1Q8WUH2 860 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 CAPN11Q9UMQ6 739 aa17.09■□□□□ 0.33
SAFB-205ENST00000588852 EPHB6O15197 1021 aa17.08■□□□□ 0.33
SAFB-205ENST00000588852 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.33
SAFB-205ENST00000588852 PDE4DQ08499 809 aa17.08■□□□□ 0.33
SAFB-205ENST00000588852 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.33
SAFB-205ENST00000588852 EXOC4Q96A65 974 aa17.08■□□□□ 0.33
SAFB-205ENST00000588852 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.33
SAFB-205ENST00000588852 KBTBD4Q9NVX7 518 aa17.08■□□□□ 0.33
SAFB-205ENST00000588852 SMARCAL1Q9NZC9 954 aa17.08■□□□□ 0.33
SAFB-205ENST00000588852 ZNF263O14978 683 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 CCNT1O60563 726 aaKnown RBP17.08■□□□□ 0.32
SAFB-205ENST00000588852 CALML3P27482 149 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
SAFB-205ENST00000588852 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 SAR1BQ9Y6B6 198 aa17.08■□□□□ 0.32
SAFB-205ENST00000588852 PSMA7O14818 248 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms