RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ARMCX2Q7L311 632 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 FAM126BQ8IXS8 530 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
BRCA1-225ENST00000586385 APPBP2Q92624 585 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 ECHDC1Q9NTX5 307 aa14.22□□□□□ -0.13
BRCA1-225ENST00000586385 ZNF536O15090 1300 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-225ENST00000586385 ARVCFO00192 962 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 GPAA1O43292 621 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 ZBED4O75132 1171 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 ACRP10323 421 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 FAM133AQ8N9E0 248 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 GLT1D1Q96MS3 346 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 ABHD16BQ9H3Z7 469 aa14.21□□□□□ -0.13
BRCA1-225ENST00000586385 MYH7P12883 1935 aa14.21□□□□□ -0.14
BRCA1-225ENST00000586385 GRIN2DO15399 1336 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 A0A0U1RQG5 324 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-225ENST00000586385 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 RNF113AO15541 343 aaKnown RBP14.2□□□□□ -0.14
BRCA1-225ENST00000586385 CD4P01730 458 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 OAZ1P54368 228 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 BEX3Q00994 111 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 ADGRE1Q14246 886 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 ZNF365Q70YC5 407 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 ANKRD35Q8N283 1001 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
BRCA1-225ENST00000586385 CHST13Q8NET6 341 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 PPP1R12CQ9BZL4 782 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 CXXC1Q9P0U4 656 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-225ENST00000586385 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
BRCA1-225ENST00000586385 UMODL1Q5DID0 1318 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 FOXP2O15409 715 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 CYP2C18P33260 490 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 PPIGQ13427 754 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 19.2
BRCA1-225ENST00000586385 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 AGBL1Q96MI9 1066 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 SEC62Q99442 399 aaKnown RBP14.19□□□□□ -0.14
BRCA1-225ENST00000586385 A1CFQ9NQ94 594 aaKnown RBP14.19□□□□□ -0.14
BRCA1-225ENST00000586385 HOMER2Q9NSB8 354 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 SYNPO2Q9UMS6 1093 aa14.19□□□□□ -0.14
BRCA1-225ENST00000586385 GNEQ9Y223 722 aaKnown RBP14.19□□□□□ -0.14
BRCA1-225ENST00000586385 MROH7Q68CQ1 1323 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 TTLL1O95922 423 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 BMP3P12645 472 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 CXCL17Q6UXB2 119 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 IFNL3Q8IZI9 196 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 PRDM12Q9H4Q4 367 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 DCTPP1Q9H773 170 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 MCM3APO60318 1980 aa14.18□□□□□ -0.14
BRCA1-225ENST00000586385 TMEM232C9JQI7 657 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 TDO2P48775 406 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 SNAP25P60880 206 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 TJAP1Q5JTD0 557 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 ZNF444Q8N0Y2 327 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-225ENST00000586385 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 VTI1AQ96AJ9 217 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 CHMP4CQ96CF2 233 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
BRCA1-225ENST00000586385 PDGFCQ9NRA1 345 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 RCAN3Q9UKA8 241 aa14.17□□□□□ -0.14
BRCA1-225ENST00000586385 YBX2Q9Y2T7 364 aaKnown RBP14.17□□□□□ -0.14
BRCA1-225ENST00000586385 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
BRCA1-225ENST00000586385 SMPD1P17405 629 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 GNAT2P19087 354 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 TMEM199Q8N511 208 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-225ENST00000586385 SYMPKQ92797 1274 aaKnown RBP14.16□□□□□ -0.14
BRCA1-225ENST00000586385 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 WNT8AQ9H1J5 351 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 ACAD9Q9H845 621 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 SPC25Q9HBM1 224 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 IL23AQ9NPF7 189 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
BRCA1-225ENST00000586385 MUC3AQ02505 3323 aa14.16□□□□□ -0.14
BRCA1-225ENST00000586385 APPP05067 770 aa14.15□□□□□ -0.14
BRCA1-225ENST00000586385 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-225ENST00000586385 MCCP23508 829 aa14.15□□□□□ -0.14
BRCA1-225ENST00000586385 TFAP4Q01664 338 aa14.15□□□□□ -0.14
BRCA1-225ENST00000586385 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
BRCA1-225ENST00000586385 PSRC1Q6PGN9 363 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-225ENST00000586385 CCDC129Q6ZRS4 1044 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms