RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 SMC5Q8IY18 1101 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 DEFB123Q8N688 67 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 FGD4Q96M96 766 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 PRDM5Q9NQX1 630 aaPredicted RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 IL17RBQ9NRM6 502 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 ZHX1Q9UKY1 873 aaPredicted RBP16.64■□□□□ 0.25
HDAC5-203ENST00000586339 A0A0C4DFX4 3053 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 ZNF536O15090 1300 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
HDAC5-203ENST00000586339 A0A0D9SFI3 127 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
HDAC5-203ENST00000586339 MCCP23508 829 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 ARMCX2Q7L311 632 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 KLHDC9Q8NEP7 349 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 RNF146Q9NTX7 359 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
HDAC5-203ENST00000586339 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 FGAP02671 866 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 CLTBP09497 229 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
HDAC5-203ENST00000586339 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
HDAC5-203ENST00000586339 TLE2Q04725 743 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 LENG1Q96BZ8 264 aaPredicted RBP16.62■□□□□ 0.25
HDAC5-203ENST00000586339 TOX2Q96NM4 488 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 LNPKQ9C0E8 428 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
HDAC5-203ENST00000586339 SPC25Q9HBM1 224 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
HDAC5-203ENST00000586339 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
HDAC5-203ENST00000586339 MYH6P13533 1939 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 TRIM43BA6NCK2 446 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 NMT2O60551 498 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 NT5C2P49902 561 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 ACLYP53396 1101 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 FAM109BQ6ICB4 259 aaPredicted RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 KCTD1Q719H9 257 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 ANKRD33Q7Z3H0 272 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 PCSK9Q8NBP7 692 aaKnown RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
HDAC5-203ENST00000586339 STARD7Q9NQZ5 370 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 MTMR10Q9NXD2 777 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
HDAC5-203ENST00000586339 ASB14A6NK59 587 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 KIAA0355O15063 1070 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
HDAC5-203ENST00000586339 GJA9P57773 515 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-203ENST00000586339 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 Q7L0L9 218 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-203ENST00000586339 BADQ92934 168 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 AGBL1Q96MI9 1066 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 TRERF1Q96PN7 1200 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 KATNBL1Q9H079 304 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 OSBPL3Q9H4L5 887 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 ELP1O95163 1332 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 MROH7Q68CQ1 1323 aa16.6■□□□□ 0.25
HDAC5-203ENST00000586339 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
HDAC5-203ENST00000586339 ICAM1P05362 532 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 ALAS1P13196 640 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 NKX3-2P78367 333 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 CNTN2Q02246 1040 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 KCNA10Q16322 511 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 CCDC96Q2M329 555 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 GLT1D1Q96MS3 346 aa16.59■□□□□ 0.25
HDAC5-203ENST00000586339 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
HDAC5-203ENST00000586339 DCDC2CA8MYV0 355 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 C6orf222P0C671 652 aaPredicted RBP16.58■□□□□ 0.24
HDAC5-203ENST00000586339 RRP12Q5JTH9 1297 aaKnown RBP16.58■□□□□ 0.24
HDAC5-203ENST00000586339 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 RNF41Q9H4P4 317 aaPredicted RBP16.58■□□□□ 0.24
HDAC5-203ENST00000586339 CYP39A1Q9NYL5 469 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 MYO9BQ13459 2157 aa16.58■□□□□ 0.24
HDAC5-203ENST00000586339 LOC102724159A0A0B4J2E5 919 aa16.57■□□□□ 0.24
HDAC5-203ENST00000586339 MYADML2A6NDP7 307 aa16.57■□□□□ 0.24
HDAC5-203ENST00000586339 ADCY6O43306 1168 aa16.57■□□□□ 0.24
HDAC5-203ENST00000586339 RAG1P15918 1043 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms