RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 SCLYQ96I15 445 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 BCL11AQ9H165 835 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 MCM3APO60318 1980 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 PRRC2BQ5JSZ5 2229 aaKnown RBP12.27□□□□□ -0.44
GGA3-219ENST00000584550 EPOPA6NHQ4 379 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 CTAGE5O15320 804 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 PRKAB2O43741 272 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
GGA3-219ENST00000584550 CA3P07451 260 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 PTGS1P23219 599 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
GGA3-219ENST00000584550 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 PCDHA11Q9Y5I1 949 aa12.27□□□□□ -0.45
GGA3-219ENST00000584550 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
GGA3-219ENST00000584550 HMMRO75330 724 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 PDE6AP16499 860 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ATP2A2P16615 1042 aaKnown RBP12.26□□□□□ -0.45
GGA3-219ENST00000584550 COPB2P35606 906 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 CDK8P49336 464 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ITGA7Q13683 1181 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
GGA3-219ENST00000584550 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 CRBNQ96SW2 442 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 TEX13BQ9BXU2 312 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
GGA3-219ENST00000584550 BAZ2AQ9UIF9 1905 aaKnown RBP12.25□□□□□ -0.45
GGA3-219ENST00000584550 B4GALT4O60513 344 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 GPR37L1O60883 481 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 PSMC6P62333 389 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 TTLL4Q14679 1199 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 DEFB128Q7Z7B8 93 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 AACSQ86V21 672 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 CCDC144CPQ8IYA2 1237 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
GGA3-219ENST00000584550 HLA-CQ95604 372 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 NOC4LQ9BVI4 516 aaKnown RBP12.25□□□□□ -0.45
GGA3-219ENST00000584550 CD320Q9NPF0 282 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
GGA3-219ENST00000584550 GRIN2DO15399 1336 aa12.25□□□□□ -0.45
GGA3-219ENST00000584550 ASTN1O14525 1302 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 TNFAIP2Q03169 654 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
GGA3-219ENST00000584550 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 VWCEQ96DN2 955 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 FGD4Q96M96 766 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 RAVER2Q9HCJ3 691 aaKnown RBP12.24□□□□□ -0.45
GGA3-219ENST00000584550 COG5Q9UP83 839 aa12.24□□□□□ -0.45
GGA3-219ENST00000584550 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
GGA3-219ENST00000584550 CTDP1Q9Y5B0 961 aaPredicted RBP12.24□□□□□ -0.45
GGA3-219ENST00000584550 DDX49Q9Y6V7 483 aaKnown RBP12.24□□□□□ -0.45
GGA3-219ENST00000584550 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 USP17L21D6R901 530 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 GOLIM4O00461 696 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 DYNC1LI2O43237 492 aaPredicted RBP12.23□□□□□ -0.45
GGA3-219ENST00000584550 ARHGEF15O94989 841 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
GGA3-219ENST00000584550 CNTN2Q02246 1040 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
GGA3-219ENST00000584550 FSCN1Q16658 493 aaKnown RBP12.23□□□□□ -0.45
GGA3-219ENST00000584550 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
GGA3-219ENST00000584550 KATNBL1Q9H079 304 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 IL1RAPL2Q9NP60 686 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 HOMER2Q9NSB8 354 aa12.23□□□□□ -0.45
GGA3-219ENST00000584550 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 ZBED4O75132 1171 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 MBD4O95243 580 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 CYP2C9P11712 490 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 TMEM63BQ5T3F8 832 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms