RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
PPP4R1-224ENST00000583092 ELP1O95163 1332 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 ALPK3Q96L96 1907 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 ALAS1P13196 640 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 FPGSQ05932 587 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 SHHQ15465 462 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 CCDC144BQ3MJ40 725 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 RWDD1Q9H446 243 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
PPP4R1-224ENST00000583092 MYH7P12883 1935 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 TRIM43BA6NCK2 446 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 B4DLN1 442 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CABYRO75952 493 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 ALX1Q15699 326 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 TRIM43Q96BQ3 446 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 SEZ6LQ9BYH1 1024 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 CCPG1Q9ULG6 757 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
PPP4R1-224ENST00000583092 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 ORC4O43929 436 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 PDE1AP54750 535 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 GJA9P57773 515 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 IQSEC1Q6DN90 963 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 TMEM199Q8N511 208 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 KLHDC9Q8NEP7 349 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 RNF41Q9H4P4 317 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
PPP4R1-224ENST00000583092 RLFQ13129 1914 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 ARVCFO00192 962 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 TIMP1P01033 207 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 ASGR1P07306 291 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 TOP1P11387 765 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 PPIGQ13427 754 aaKnown RBP eCLIP12.09□□□□□ -0.471e-10■□□□□ 10.2
PPP4R1-224ENST00000583092 C9orf50Q5SZB4 431 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 TTC14Q96N46 770 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 CRBNQ96SW2 442 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 MTIF3Q9H2K0 278 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 RANBP2P49792 3224 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-224ENST00000583092 TMEM265A0A087WTH1 108 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 FGAP02671 866 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 NT5C2P49902 561 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 CNTN2Q02246 1040 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 FAM133AQ8N9E0 248 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 Q9Y3F1 56 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.48
PPP4R1-224ENST00000583092 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
PPP4R1-224ENST00000583092 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
PPP4R1-224ENST00000583092 HIP1O00291 1037 aa12.07□□□□□ -0.48
PPP4R1-224ENST00000583092 NMT2O60551 498 aa12.07□□□□□ -0.48
PPP4R1-224ENST00000583092 ICAM1P05362 532 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms