RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 LNPKQ9C0E8 428 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 ACAD9Q9H845 621 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 TCP11L1Q9NUJ3 509 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
PRPF8-206ENST00000572723 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
PRPF8-206ENST00000572723 TACC3Q9Y6A5 838 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 ZNF536O15090 1300 aa13.86□□□□□ -0.19
PRPF8-206ENST00000572723 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 NMT2O60551 498 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 FGD4Q96M96 766 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 AGBL1Q96MI9 1066 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 TRERF1Q96PN7 1200 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 SPC25Q9HBM1 224 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 PRDM5Q9NQX1 630 aaPredicted RBP13.85□□□□□ -0.19
PRPF8-206ENST00000572723 PDLIM7Q9NR12 457 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
PRPF8-206ENST00000572723 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
PRPF8-206ENST00000572723 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 A0A1W2PQ45 241 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 A0A1W2PQY0 241 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 ACLYP53396 1101 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 KCNA10Q16322 511 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 CCSAPQ6IQ19 270 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 ARMCX2Q7L311 632 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 SH3RF1Q7Z6J0 888 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 PCSK9Q8NBP7 692 aaKnown RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 DCAF4Q8WV16 495 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 BADQ92934 168 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 TRIM43Q96BQ3 446 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-206ENST00000572723 TTC14Q96N46 770 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 HOMER2Q9NSB8 354 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 RNF146Q9NTX7 359 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
PRPF8-206ENST00000572723 ASB14A6NK59 587 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 CLTBP09497 229 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 TOP1P11387 765 aaKnown RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 ALAS1P13196 640 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 CST5P28325 142 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 GJA9P57773 515 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 FAM109BQ6ICB4 259 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 LENG1Q96BZ8 264 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
PRPF8-206ENST00000572723 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 ELP1O95163 1332 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
PRPF8-206ENST00000572723 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 DCDC2CA8MYV0 355 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 IGHDP01880 384 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 SDSP20132 328 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 NKX3-2P78367 333 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 NUCB1Q02818 461 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 SHHQ15465 462 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 RRP12Q5JTH9 1297 aaKnown RBP13.82□□□□□ -0.2
PRPF8-206ENST00000572723 GNASQ5JWF2 1037 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 CCDC174Q6PII3 467 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 Q7L0L9 218 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
PRPF8-206ENST00000572723 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
PRPF8-206ENST00000572723 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
PRPF8-206ENST00000572723 LTBP2Q14767 1821 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 PQBP1O60828 265 aaKnown RBP13.81□□□□□ -0.2
PRPF8-206ENST00000572723 ICAM1P05362 532 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
PRPF8-206ENST00000572723 NT5C2P49902 561 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 CDK7P50613 346 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 SNAP25P60880 206 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 TNFAIP2Q03169 654 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 CCDC96Q2M329 555 aa13.81□□□□□ -0.2
PRPF8-206ENST00000572723 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
PRPF8-206ENST00000572723 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms