RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 BASP1P80723 227 aaKnown RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SLMAPQ14BN4 828 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 MYLK4Q86YV6 388 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-248ENST00000558190 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
ATXN3-248ENST00000558190 SPDYE3A6NKU9 549 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 IFNB1P01574 187 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 RNF169Q8NCN4 708 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 RAPGEF5Q92565 580 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MCF2P10911 925 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TRIM14Q14142 442 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MESDQ14696 234 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TTLL11Q8NHH1 800 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MLXIPLQ9NP71 852 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 DCTN4Q9UJW0 460 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 HAUS8Q9BT25 410 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 STOML1Q9UBI4 398 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TBK1Q9UHD2 729 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 E4F1Q66K89 784 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 STXBP4Q6ZWJ1 553 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 NELFCDQ8IXH7 590 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 PRPF31Q8WWY3 499 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 KCNF1Q9H3M0 494 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ADGRG1Q9Y653 693 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 PFKFB1P16118 471 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ESR2Q92731 530 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 RNPC3Q96LT9 517 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 OSBPL9Q96SU4 736 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 DRP2Q13474 957 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MS4A14Q96JA4 679 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 LBHD1Q9BQE6 289 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ARIH1Q9Y4X5 557 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 NAA35Q5VZE5 725 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 BAG5Q9UL15 447 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 EEF1GP26641 437 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 LSM14BQ9BX40 385 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 USP44Q9H0E7 712 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TRMT112Q9UI30 125 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SNUPNO95149 360 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 NR1I3Q14994 352 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 HEATR4Q86WZ0 1026 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SKAP2O75563 359 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ADARP55265 1226 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 C2orf54Q08AI8 447 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 KCTD21Q4G0X4 260 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ZSCAN29Q8IWY8 852 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 KRT2P35908 639 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 LMBRD2Q68DH5 695 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ANKLE2Q86XL3 938 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 DDX42Q86XP3 938 aaKnown RBP eCLIP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 RSAD2Q8WXG1 361 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 GPCPD1Q9NPB8 672 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TSC22D4Q9Y3Q8 395 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 HDAC4P56524 1084 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 PPIDQ08752 370 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 C19orf44Q9H6X5 657 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF148Q9UQR1 794 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 NUGGCQ68CJ6 796 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ARHGAP22Q7Z5H3 698 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 EFHD1Q9BUP0 239 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 BTBD18B2RXH4 712 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 STARD3NLO95772 234 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ADCY2Q08462 1091 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 PPP2R5DQ14738 602 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MYCT1Q8N699 235 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 AZI2Q9H6S1 392 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TXNDC16Q9P2K2 825 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CD2APQ9Y5K6 639 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CNTRLQ7Z7A1 2325 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 KRT8P05787 483 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ACADSP16219 412 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 STAT1P42224 750 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SIRT2Q8IXJ6 389 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF287Q9HBT7 754 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SEPT3Q9UH03 358 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC61Q9Y6R9 512 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ZRANB2O95218 330 aaKnown RBP eCLIP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 UBTFL6P0CB48 400 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 GYS1P13807 737 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CTCFP49711 727 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 PAK1Q13153 545 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 BBOF1Q8ND07 529 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CYP4F22Q6NT55 531 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SYT2Q8N9I0 419 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 NMD3Q96D46 503 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 XPO6Q96QU8 1125 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 SMAPO00193 183 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TTBK2Q6IQ55 1244 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 DZIP3Q86Y13 1208 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 LPIN2Q92539 896 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 LRWD1Q9UFC0 647 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 MTO1Q9Y2Z2 717 aaKnown RBP4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ZNF185O15231 689 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 FOXO3O43524 673 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 FTCDO95954 541 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 ADCK5Q3MIX3 580 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 TCP11X2Q5H9J9 407 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 OSBPL1AQ9BXW6 950 aa4.03□□□□□ -1.76
ATXN3-248ENST00000558190 CACNA2D1P54289 1103 aa4.03□□□□□ -1.77
ATXN3-248ENST00000558190 CASC4Q6P4E1 433 aa4.03□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF653Q96CK0 615 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms