RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CD19P15391 556 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 MAP2K1Q02750 393 aaPredicted RBP19.26■□□□□ 0.67
PTPN21-208ENST00000556564 DMP1Q13316 513 aaPredicted RBP19.26■□□□□ 0.67
PTPN21-208ENST00000556564 TMEM179Q6ZVK1 233 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 FAM193BQ96PV7 902 aaPredicted RBP19.26■□□□□ 0.67
PTPN21-208ENST00000556564 USP28Q96RU2 1077 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 CAMTA2O94983 1202 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 FAM83BQ5T0W9 1011 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 DEFB132Q7Z7B7 95 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPN21-208ENST00000556564 FSD2A1L4K1 749 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 CTAGE9A4FU28 777 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 MIS18BP1Q6P0N0 1132 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 CNGA4Q8IV77 575 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 MLKLQ8NB16 471 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 MROH7-TTC4A0A0A0MT08 1334 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 PNMA3Q9UL41 463 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 ARHGAP44Q17R89 818 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 CCDC114Q96M63 670 aa19.25■□□□□ 0.67
PTPN21-208ENST00000556564 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 ZEB2O60315 1214 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 ZNF569Q5MCW4 686 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 STRBPQ96SI9 672 aaKnown RBP19.24■□□□□ 0.67
PTPN21-208ENST00000556564 MED10Q9BTT4 135 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 INCENPQ9NQS7 918 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 CSPG5O95196 566 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 ASNSP08243 561 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 FMNL3Q8IVF7 1028 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 TBCKQ8TEA7 893 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 SYMPKQ92797 1274 aaKnown RBP19.24■□□□□ 0.67
PTPN21-208ENST00000556564 PPP1R16BQ96T49 567 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 ADPGKQ9BRR6 497 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
PTPN21-208ENST00000556564 RABGAP1Q9Y3P9 1069 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 FAM160B2Q86V87 743 aa19.24■□□□□ 0.67
PTPN21-208ENST00000556564 VWA3BQ502W6 1294 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 LIN9Q5TKA1 542 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 PPP1R9BQ96SB3 815 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 YARSP54577 528 aaKnown RBP19.23■□□□□ 0.67
PTPN21-208ENST00000556564 RNF26Q9BY78 433 aaPredicted RBP19.23■□□□□ 0.67
PTPN21-208ENST00000556564 OTUD5Q96G74 571 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 KCNG1Q9UIX4 513 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 FANCCQ00597 558 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 FAM178BQ8IXR5 827 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 BAG1Q99933 345 aaPredicted RBP19.23■□□□□ 0.67
PTPN21-208ENST00000556564 DAPK3O43293 454 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 NR1I2O75469 434 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 TBC1D16Q8TBP0 767 aa19.23■□□□□ 0.67
PTPN21-208ENST00000556564 RGS12O14924 1447 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 CTAGE15A4D2H0 777 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 SPOPO43791 374 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 CTAGE8P0CG41 777 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 CTAGE6Q86UF2 777 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 CTAGE4Q8IX94 777 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 MICALL2Q8IY33 904 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 SLC44A5Q8NCS7 719 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 MMS19Q96T76 1030 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
PTPN21-208ENST00000556564 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
PTPN21-208ENST00000556564 NOX5Q96PH1 765 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 CD163L1Q9NR16 1453 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 NEDD4P46934 1319 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 ADALQ6DHV7 355 aa19.22■□□□□ 0.67
PTPN21-208ENST00000556564 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 USP17L5A8MUK1 530 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 TSGA10Q9BZW7 698 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
PTPN21-208ENST00000556564 RFX1P22670 979 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 SEPT2Q15019 361 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 CCDC122Q5T0U0 273 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 SPATA31D1Q6ZQQ2 1576 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 P4HA1P13674 534 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 CBX8Q9HC52 389 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 SLC39A2Q9NP94 309 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 USTQ9Y2C2 406 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 NRXN1Q9ULB1 1477 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 DPEP1P16444 411 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 SEL1L2Q5TEA6 688 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 IWS1Q96ST2 819 aa19.21■□□□□ 0.67
PTPN21-208ENST00000556564 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 NMT2O60551 498 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 SLC15A2Q16348 729 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 MTMR6Q9Y217 621 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 MEIS1O00470 390 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 MARK3P27448 753 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
PTPN21-208ENST00000556564 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 TNNC2P02585 160 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 DLATP10515 647 aaKnown RBP19.2■□□□□ 0.66
PTPN21-208ENST00000556564 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 PLEKHA8P1O95397 391 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 SLF1Q9BQI6 1058 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 IQCA1LA6NCM1 817 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 BCRP11274 1271 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms