RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SERPINC1P01008 464 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 TPM4P67936 248 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 CFAP100Q494V2 611 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 SWAP70Q9UH65 585 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 FBXO41Q8TF61 875 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 UBXN4Q92575 508 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 TIGD1Q96MW7 591 aa16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-201ENST00000554308 STXBP3O00186 592 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 POLR3GO15318 223 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 ZRANB2O95218 330 aaKnown RBP eCLIP16.59■□□□□ 0.257e-6■■■■■ 37.3
PPP4R3A-201ENST00000554308 KCNJ6P48051 423 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 NAPAP54920 295 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 CCDC194A0A1B0GVG4 234 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 TADA3O75528 432 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 FKBP1AP62942 108 aaKnown RBP16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 FOXP4Q8IVH2 680 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 RTKN2Q8IZC4 609 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 SPZ1Q9BXG8 430 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 FANCLQ9NW38 375 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 PI4KBQ9UBF8 816 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
PPP4R3A-201ENST00000554308 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 FAM237AA0A1B0GTK4 181 aa16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 IKBKBO14920 756 aa16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 HDLBPQ00341 1268 aaKnown RBP16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 MNS1Q8NEH6 495 aa16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 SERTAD1Q9UHV2 236 aa16.58■□□□□ 0.25
PPP4R3A-201ENST00000554308 SLC16A2P36021 539 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 NOVP48745 357 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 INF2Q27J81 1249 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 CERKLQ49MI3 558 aaPredicted RBP16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZNF579Q8NAF0 562 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 TRERF1Q96PN7 1200 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 IDI2Q9BXS1 227 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 DHX36Q9H2U1 1008 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 TMEM51Q9NW97 253 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 TUBE1Q9UJT0 475 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 PCDHA6Q9UN73 950 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 PCDHA8Q9Y5H6 950 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 PCDHA5Q9Y5H7 936 aa16.58■□□□□ 0.24
PPP4R3A-201ENST00000554308 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 PSMD14O00487 310 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 NRDCO43847 1150 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 MYL5Q02045 173 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 KCTD1Q719H9 257 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 TMEM139Q8IV31 216 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 VSTM4Q8IW00 320 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC148Q8NFR7 591 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 SYMPKQ92797 1274 aaKnown RBP16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 DHX58Q96C10 678 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 WDR24Q96S15 920 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC66A2RUB6 948 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 SMCO2A6NFE2 343 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 CYP2C19P33261 490 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 TTBK2Q6IQ55 1244 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
PPP4R3A-201ENST00000554308 A0A087X0B3 334 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 SASH3O75995 380 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 GDF11O95390 407 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 BMP6P22004 513 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 CDC25AP30304 524 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 COA7Q96BR5 231 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 CCDC96Q2M329 555 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZBTB9Q96C00 473 aa16.56■□□□□ 0.24
PPP4R3A-201ENST00000554308 BMP15O95972 392 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 TOGARAM2Q6ZUX3 1019 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 FERMT2Q96AC1 680 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 EHD4Q9H223 541 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
PPP4R3A-201ENST00000554308 M0R2N6 131 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms