RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SLC25A27O95847 323 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 PGK2P07205 417 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 PTH1RQ03431 593 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-218ENST00000552839 MMP19Q99542 508 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 TMX2Q9Y320 296 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
TMEM116-218ENST00000552839 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 C8orf34Q49A92 452 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ANKRD33Q7Z3H0 272 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-218ENST00000552839 DYNLL2Q96FJ2 89 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM116-218ENST00000552839 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
TMEM116-218ENST00000552839 ROBO3Q96MS0 1386 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 DCDC2CA8MYV0 355 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 ADAMTS4O75173 837 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 AKR1A1P14550 325 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 AKR1B1P15121 316 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 ICA1Q05084 483 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TIFAQ96CG3 184 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TSEN34Q9BSV6 310 aaKnown RBP13.37□□□□□ -0.27
TMEM116-218ENST00000552839 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
TMEM116-218ENST00000552839 MCM3APO60318 1980 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 GBF1Q92538 1859 aa13.37□□□□□ -0.27
TMEM116-218ENST00000552839 TSPY2A6NKD2 308 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
TMEM116-218ENST00000552839 EPB41L2O43491 1005 aaKnown RBP13.36□□□□□ -0.27
TMEM116-218ENST00000552839 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
TMEM116-218ENST00000552839 PRDM1O75626 825 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 TIMP1P01033 207 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
TMEM116-218ENST00000552839 PBX2P40425 430 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 CDK8P49336 464 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 ACLYP53396 1101 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 KRT32Q14532 448 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 KCTD2Q14681 263 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 AKNAD1Q5T1N1 836 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 KLHDC9Q8NEP7 349 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 KRT23Q9C075 422 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
TMEM116-218ENST00000552839 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 VWA5AO00534 786 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 SLC27A2O14975 620 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 FOXP2O15409 715 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 STAT3P40763 770 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-218ENST00000552839 KCNA10Q16322 511 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 TMEM240Q5SV17 173 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-218ENST00000552839 C16orf59Q7L2K0 433 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 ESR2Q92731 530 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 GAS2L1Q99501 681 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-218ENST00000552839 PBX4Q9BYU1 374 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-218ENST00000552839 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
TMEM116-218ENST00000552839 TCF20Q9UGU0 1960 aaKnown RBP13.34□□□□□ -0.27
TMEM116-218ENST00000552839 ERICH2A1L162 156 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 CYP21A2P08686 494 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 FGD1P98174 961 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
TMEM116-218ENST00000552839 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 MFSD5Q6N075 450 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
TMEM116-218ENST00000552839 CCDC17Q96LX7 622 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 CNPY2Q9Y2B0 182 aa13.34□□□□□ -0.27
TMEM116-218ENST00000552839 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms