RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 A1BGP04217 495 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 SRLQ86TD4 932 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 EPC1Q9H2F5 836 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 KDRP35968 1356 aa17.38■□□□□ 0.37
RBFOX1-212ENST00000550418 POLR2FP61218 127 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 CEP120Q8N960 986 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 SLFN14P0C7P3 912 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 BCRP11274 1271 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 PDCLQ13371 301 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 LPIN2Q92539 896 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 CNOT6LQ96LI5 555 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 VPS37BQ9H9H4 285 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 DBNLQ9UJU6 430 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 TPD52P55327 224 aaPredicted RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 FOXP1Q9H334 677 aaPredicted RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 PTCH1Q13635 1447 aa17.37■□□□□ 0.37
RBFOX1-212ENST00000550418 LDHBP07195 334 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 LIN9Q5TKA1 542 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 TOGARAM2Q6ZUX3 1019 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 CCDC13Q8IYE1 715 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 CTIFO43310 598 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 CXCR5P32302 372 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 MSANTD4Q8NCY6 345 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 P3H4Q92791 437 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 TLR7Q9NYK1 1049 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 XRCC5P13010 732 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 OPHN1O60890 802 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 MFAP3LO75121 409 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 APOA5Q6Q788 366 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 ADAT2Q7Z6V5 191 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 WHAMMQ8TF30 809 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
RBFOX1-212ENST00000550418 HMGB1P1B2RPK0 211 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 TTLL12Q14166 644 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 ZKSCAN8Q15776 578 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 RUNDC3BQ96NL0 473 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 TADA3O75528 432 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 CNOT10Q9H9A5 744 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 LGSNQ5TDP6 509 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 MAK16Q9BXY0 300 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 WDR44Q5JSH3 913 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 NAA35Q5VZE5 725 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 IFNL3Q8IZI9 196 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 ARMCX3Q9UH62 379 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 DNM3Q9UQ16 869 aa17.35■□□□□ 0.37
RBFOX1-212ENST00000550418 ARHGAP44Q17R89 818 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 REXO1Q8N1G1 1221 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 RILPQ96NA2 401 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 EXOC3O60645 756 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 BAG2O95816 211 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 IRX4P78413 519 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 ZBED6P86452 979 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 PPARAQ07869 468 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 BPIFA3Q9BQP9 254 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 LZTS2Q9BRK4 669 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 TRIM6Q9C030 488 aaPredicted RBP17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 UNC13BO14795 1591 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 THAP12O43422 761 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 RFC1P35251 1148 aaPredicted RBP17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 SLC7A5Q01650 507 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 BIRC3Q13489 604 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 CCDC14Q49A88 953 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 GPCPD1Q9NPB8 672 aa17.34■□□□□ 0.37
RBFOX1-212ENST00000550418 GGCXP38435 758 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 ST5P78524 1137 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 TAF11Q15544 211 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 CFAP61Q8NHU2 1237 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 PCDHB13Q9Y5F0 798 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 EVI5O60447 810 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 ADCY7P51828 1080 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 FAM133BQ5BKY9 247 aaKnown RBP17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 NOVA2Q9UNW9 492 aaKnown RBP17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.37
RBFOX1-212ENST00000550418 TRIM66O15016 1216 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 CYP27A1Q02318 531 aa17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 DHX9Q08211 1270 aaKnown RBP17.33■□□□□ 0.36
RBFOX1-212ENST00000550418 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms