RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 NONOQ15233 471 aaKnown RBP eCLIP20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 DOK7Q18PE1 504 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 LETM2Q2VYF4 491 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 CTAGE1Q96RT6 745 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 PLIN2Q99541 437 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 L2HGDHQ9H9P8 463 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 RMND1Q9NWS8 449 aa20.93■□□□□ 0.94
PRPF40B-208ENST00000548436 CCNT1O60563 726 aaKnown RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 PRCPP42785 496 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 PAK1Q13153 545 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 CLEC10AQ8IUN9 316 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 LRRC47Q8N1G4 583 aaKnown RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 NELFBQ8WX92 580 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 CCDC94Q9BW85 323 aaPredicted RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 MAPK8IP1Q9UQF2 711 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 IGKV6D-41A0A0C4DH26 115 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 SCNN1DP51172 638 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 EIF6P56537 245 aaKnown RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 DPP8Q6V1X1 898 aaPredicted RBP20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 TOGARAM2Q6ZUX3 1019 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 IGSF22Q8N9C0 903 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 RASSF8Q8NHQ8 419 aa20.92■□□□□ 0.94
PRPF40B-208ENST00000548436 MYH4Q9Y623 1939 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 AKR1B15C9JRZ8 316 aaPredicted RBP20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 FANCGO15287 622 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 ZSCAN12O43309 604 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 SLU7O95391 586 aaKnown RBP20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 NPR1P16066 1061 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 RBL2Q08999 1139 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 KRT31Q15323 416 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 CCDC93Q567U6 631 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 PPP4R3BQ5MIZ7 849 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 SOGA3Q5TF21 947 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 USP40Q9NVE5 1235 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 DNAI1Q9UI46 699 aa20.91■□□□□ 0.94
PRPF40B-208ENST00000548436 OR52Z1P0C646 297 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 NEK8Q86SG6 692 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 ERO1AQ96HE7 468 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 KBTBD4Q9NVX7 518 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 BIN2Q9UBW5 565 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 V9GYY5 206 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 KLRC4O43908 158 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 CCT6AP40227 531 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 FILIP1LQ4L180 1135 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 JAKMIP3Q5VZ66 844 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 TBCKQ8TEA7 893 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 TMEM260Q9NX78 707 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 PHLPP2Q6ZVD8 1323 aa20.9■□□□□ 0.94
PRPF40B-208ENST00000548436 ESYT2A0FGR8 921 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 LRRC10BA6NIK2 292 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 SNHG28P0DPA3 235 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 KMT5BQ4FZB7 885 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 PANX2Q96RD6 677 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 SERPINB13Q9UIV8 391 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 GREB1LQ9C091 1923 aaPredicted RBP20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 ASPRV1Q53RT3 343 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 CDC42EP5Q6NZY7 148 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 CABP7Q86V35 215 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 ADSSL1Q8N142 457 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 REXO1Q8N1G1 1221 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 CPLX3Q8WVH0 158 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 AKT1S1Q96B36 256 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 COA7Q96BR5 231 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 AK8Q96MA6 479 aa20.89■□□□□ 0.93
PRPF40B-208ENST00000548436 PLCG1P19174 1290 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 ALDH1B1P30837 517 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 SHMT1P34896 483 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 KCNB1Q14721 858 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 MTF1Q14872 753 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 TCP11X2Q5H9J9 407 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 PPFIBP1Q86W92 1011 aa20.88■□□□□ 0.93
PRPF40B-208ENST00000548436 TRIM49BA6NDI0 452 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 APOBEC3HQ6NTF7 200 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 LRRN4CLQ8ND94 238 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 DESI2Q9BSY9 194 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 VPS16Q9H269 839 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 GPCPD1Q9NPB8 672 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 SOWAHDA6NJG2 315 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 KCNJ18B7U540 433 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 N4BP3O15049 544 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 TTLL1O95922 423 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 GYPCP04921 128 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 MYL1P05976 194 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 TECP42680 631 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 COPB1P53618 953 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 KCNJ12Q14500 433 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 SWAP70Q9UH65 585 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 ITIH6Q6UXX5 1313 aa20.87■□□□□ 0.93
PRPF40B-208ENST00000548436 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
PRPF40B-208ENST00000548436 RHOBTB3O94955 611 aa20.86■□□□□ 0.93
PRPF40B-208ENST00000548436 CASP14P31944 242 aa20.86■□□□□ 0.93
PRPF40B-208ENST00000548436 PMS1P54277 932 aaKnown RBP20.86■□□□□ 0.93
PRPF40B-208ENST00000548436 HHIPL2Q6UWX4 724 aa20.86■□□□□ 0.93
PRPF40B-208ENST00000548436 IRF2BP1Q8IU81 584 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms