RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZSWIM4Q9H7M6 989 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 FEZ2Q9UHY8 353 aaPredicted RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 RAD21O60216 631 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 ERCC3P19447 782 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 PLA2G4AP47712 749 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 CACNB3P54284 484 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 L2HGDHQ9H9P8 463 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 BARHL2Q9NY43 387 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
DDX55-209ENST00000542286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■□□□ 13.5
DDX55-209ENST00000542286 PPP4CP60510 307 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 GSTO1P78417 241 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
DDX55-209ENST00000542286 SMCO2A6NFE2 343 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 CALML3P27482 149 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 ST5P78524 1137 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 CERS5Q8N5B7 392 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 DISC1Q9NRI5 854 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 TFR2Q9UP52 801 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 DAGLAQ9Y4D2 1042 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
DDX55-209ENST00000542286 N4BP3O15049 544 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 BMP15O95972 392 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 GYPCP04921 128 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 AKR1B1P15121 316 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 TECP42680 631 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 ACRBPQ8NEB7 543 aa16.65■□□□□ 0.26
DDX55-209ENST00000542286 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.25
DDX55-209ENST00000542286 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 NHSQ6T4R5 1651 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.25
DDX55-209ENST00000542286 GTPBP6O43824 516 aaPredicted RBP16.64■□□□□ 0.25
DDX55-209ENST00000542286 LDHCP07864 332 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 SLC16A2P36021 539 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 UBA7P41226 1012 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 DDX60LQ5H9U9 1706 aaKnown RBP16.64■□□□□ 0.25
DDX55-209ENST00000542286 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 C16orf86Q6ZW13 317 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 NAV1Q8NEY1 1877 aa16.64■□□□□ 0.25
DDX55-209ENST00000542286 MYH8P13535 1937 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 MAST2Q6P0Q8 1798 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 TRAPPC10P48553 1259 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 PAK1Q13153 545 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 DPP8Q6V1X1 898 aaPredicted RBP16.63■□□□□ 0.25
DDX55-209ENST00000542286 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 NEK11Q8NG66 645 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
DDX55-209ENST00000542286 IL1R1P14778 569 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 PLCG1P19174 1290 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 TEX35Q5T0J7 233 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 PROM2Q8N271 834 aa16.63■□□□□ 0.25
DDX55-209ENST00000542286 CDK5RAP2Q96SN8 1893 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 ROBO3Q96MS0 1386 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 PBX1P40424 430 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 IRF2BP1Q8IU81 584 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 KCNJ18B7U540 433 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
DDX55-209ENST00000542286 STX10O60499 249 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 FCER1AP12319 257 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 HSPA1LP34931 641 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 TXKP42681 527 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 KCNJ12Q14500 433 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
DDX55-209ENST00000542286 LONP1P36776 959 aaKnown RBP16.61■□□□□ 0.25
DDX55-209ENST00000542286 KCNJ6P48051 423 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 KLK7P49862 253 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 UBE2SQ16763 222 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 TMCO3Q6UWJ1 677 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 NEDD1Q8NHV4 660 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 ZRANB2O95218 330 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDX55-209ENST00000542286 TXLNAP40222 546 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 COPB1P53618 953 aaKnown RBP16.61■□□□□ 0.25
DDX55-209ENST00000542286 ERVK-24P63145 666 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 NFIAQ12857 509 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 ZNF658Q5TYW1 1059 aaPredicted RBP16.61■□□□□ 0.25
DDX55-209ENST00000542286 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
DDX55-209ENST00000542286 THSD7AQ9UPZ6 1657 aa16.61■□□□□ 0.25
DDX55-209ENST00000542286 ZSCAN12O43309 604 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 KLRC4O43908 158 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 MFAP3LO75121 409 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 TDP2O95551 362 aa16.6■□□□□ 0.25
DDX55-209ENST00000542286 TAL1P17542 331 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms