RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 RPS12P25398 132 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 CDC25BP30305 580 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 AXDND1Q5T1B0 1012 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 NDUFA8P51970 172 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 ZNF771Q7L3S4 317 aaPredicted RBP17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 NAPAP54920 295 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
CLPTM1-202ENST00000541297 SBF1O95248 1867 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 PPP6R2O75170 966 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 CALML3P27482 149 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 RASA3Q14644 834 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 DICER1Q9UPY3 1922 aaKnown RBP17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 SPECC1Q5M775 1068 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 ADGRF4Q8IZF3 695 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 MKL1Q969V6 931 aa17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
CLPTM1-202ENST00000541297 A0A087WWV3 80 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 CAVIN2O95810 425 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 SLC1A4P43007 532 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 SARM1Q6SZW1 724 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 JMYQ8N9B5 988 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 KIF18AQ8NI77 898 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 V9GYY5 206 aaPredicted RBP17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 A0A1W2PRG0 241 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 GRIN1Q05586 938 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 ZNF174Q15697 407 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 DPF2Q92785 391 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 COA7Q96BR5 231 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 MORC2Q9Y6X9 1032 aaPredicted RBP17.37■□□□□ 0.37
CLPTM1-202ENST00000541297 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 F5H6K3 240 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SKILP12757 684 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 ECE1P42892 770 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 KLRC3Q07444 240 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SHC4Q6S5L8 630 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 PGAP2Q9UHJ9 254 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 PFKFB1P16118 471 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 LMNB1P20700 586 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 TNNI2P48788 182 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 PTPN14Q15678 1187 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SPICE1Q8N0Z3 855 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SYT17Q9BSW7 474 aa17.36■□□□□ 0.37
CLPTM1-202ENST00000541297 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 NYAP1Q6ZVC0 841 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 ERCC4Q92889 916 aaPredicted RBP17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 TRMT1Q9NXH9 659 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 CMA1P23946 247 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 ATAD5Q96QE3 1844 aa17.35■□□□□ 0.37
CLPTM1-202ENST00000541297 NDUFB10O96000 172 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 GABPB1Q06547 395 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 STX1AQ16623 288 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 ACER1Q8TDN7 264 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 BECN2A8MW95 431 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 M0R2N6 131 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 NEMFO60524 1076 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 CUTAO60888 179 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 MCM7P33993 719 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 CCZ1BP86790 482 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms