RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 FEZ1Q99689 392 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 ST7Q9NRC1 585 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-214ENST00000540113 KLRF2D3W0D1 207 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 N4BP3O15049 544 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 GYPCP04921 128 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 PMS1P54277 932 aaKnown RBP13.01□□□□□ -0.33
C11orf54-214ENST00000540113 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-214ENST00000540113 COL11A2P13942 1736 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-214ENST00000540113 NRXN2Q9P2S2 1712 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 MYH8P13535 1937 aa13.01□□□□□ -0.33
C11orf54-214ENST00000540113 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 C6orf229H3BNL8 230 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 PAK1Q13153 545 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 EYA3Q99504 573 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 RGS17Q9UGC6 210 aaPredicted RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 F8W031 263 aaPredicted RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 MFAP3LO75121 409 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 CLCN6P51797 869 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 CCDC178Q5BJE1 867 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 CLEC10AQ8IUN9 316 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 FBXO41Q8TF61 875 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 UBXN4Q92575 508 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 DISC1Q9NRI5 854 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 DAGLAQ9Y4D2 1042 aa13□□□□□ -0.33
C11orf54-214ENST00000540113 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
C11orf54-214ENST00000540113 KCNJ18B7U540 433 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 APBA3O96018 575 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 LONP1P36776 959 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 NAPAP54920 295 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 EIF6P56537 245 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 KCNJ12Q14500 433 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 ZNF658Q5TYW1 1059 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 FRMPD2Q68DX3 1309 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 H2AFXP16104 143 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 TXLNAP40222 546 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 GNAQP50148 359 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 GTF2IP78347 998 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 PICALMQ13492 652 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
C11orf54-214ENST00000540113 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 TMEM260Q9NX78 707 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 RWDD2AQ9UIY3 292 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 PRDM4Q9UKN5 801 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
C11orf54-214ENST00000540113 CCNT1O60563 726 aaKnown RBP12.98□□□□□ -0.33
C11orf54-214ENST00000540113 TADA3O75528 432 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 CCDC175P0C221 793 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 PLCG2P16885 1265 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 UBA7P41226 1012 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 TCP11X2Q5H9J9 407 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
C11orf54-214ENST00000540113 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 PIGSQ96S52 555 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
C11orf54-214ENST00000540113 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
C11orf54-214ENST00000540113 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 TUBB4AP04350 444 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 ERVK-24P63145 666 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 DMTNQ08495 405 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 JAKMIP3Q5VZ66 844 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 IRF2BP1Q8IU81 584 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 CTAGE1Q96RT6 745 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 LIMA1Q9UHB6 759 aaKnown RBP12.98□□□□□ -0.33
C11orf54-214ENST00000540113 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
C11orf54-214ENST00000540113 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 UBXN1Q04323 297 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms