RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 ZPR1O75312 459 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 ACTN2P35609 894 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 PIP4K2BP78356 416 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
SFSWAP-208ENST00000539506 SRCAPQ6ZRS2 3230 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 BMP15O95972 392 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 TUBB4AP04350 444 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 CASP8Q14790 479 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 TMEM60Q9H2L4 133 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 CPVLQ9H3G5 476 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 CDC23Q9UJX2 597 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 SRLQ86TD4 932 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
SFSWAP-208ENST00000539506 CTAGE9A4FU28 777 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 CCDC151A5D8V7 595 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 N4BP3O15049 544 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 GYPCP04921 128 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 ERCC3P19447 782 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 ERVK-24P63145 666 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 NAALADL2Q58DX5 795 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 DNAJC21Q5F1R6 531 aaKnown RBP14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 HDXQ7Z353 690 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 IQUBQ8NA54 791 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 KAT14Q9H8E8 782 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 GDAQ9Y2T3 454 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 TGFBRAP1Q8WUH2 860 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 C8orf37Q96NL8 207 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 EHD4Q9H223 541 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 FAM204AQ9H8W3 233 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 KRT31Q15323 416 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 RRAGBQ5VZM2 374 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 GOLGA5Q8TBA6 731 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 PSMB7Q99436 277 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 ANKIB1Q9P2G1 1089 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 PCDHA6Q9UN73 950 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 PCDHA8Q9Y5H6 950 aa14.13□□□□□ -0.15
SFSWAP-208ENST00000539506 SBF2Q86WG5 1849 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 MAP2K7O14733 419 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 RGL2O15211 777 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 USP5P45974 858 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 HSP90B2PQ58FF3 399 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CT47A1Q5JQC4 288 aaPredicted RBP14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 DGKHQ86XP1 1220 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 IPO4Q8TEX9 1081 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 PANX2Q96RD6 677 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 SAP30BPQ9UHR5 308 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 L1RE1Q9UN81 338 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CTAGE15A4D2H0 777 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 LDHBP07195 334 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CTAGE8P0CG41 777 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CTAGE6Q86UF2 777 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CTAGE4Q8IX94 777 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 EXOC4Q96A65 974 aa14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 CCNL1Q9UK58 526 aaPredicted RBP14.12□□□□□ -0.15
SFSWAP-208ENST00000539506 MAST2Q6P0Q8 1798 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 CCDC88AQ3V6T2 1871 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 GRM4Q14833 912 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 DRC1Q96MC2 740 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 CWC15Q9P013 229 aaKnown RBP14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 LRRC10BA6NIK2 292 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 ZNF185O15231 689 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 GTPBP6O43824 516 aaPredicted RBP14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 MFAP3LO75121 409 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 KIF5BP33176 963 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 PRCPP42785 496 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 IRF2BP1Q8IU81 584 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 MAPKAPK5Q8IW41 473 aa14.11□□□□□ -0.15
SFSWAP-208ENST00000539506 TRIM49BA6NDI0 452 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 GOLGA6L9A6NEM1 432 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 RPN1P04843 607 aaKnown RBP14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 INF2Q27J81 1249 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 BTAF1O14981 1849 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 STXBP3O00186 592 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 RASA1P20936 1047 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 KRT9P35527 623 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 BRD3Q15059 726 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 VPS72Q15906 364 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 MUM1L1Q5H9M0 696 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 PACS2Q86VP3 889 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 NELFBQ8WX92 580 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 LIMA1Q9UHB6 759 aaKnown RBP14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 RWDD2AQ9UIY3 292 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
SFSWAP-208ENST00000539506 LRRC31Q6UY01 552 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms