RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
NXF1-210ENST00000531579 SGPL1O95470 568 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
NXF1-210ENST00000531579 MLLT1Q03111 559 aaPredicted RBP17.44■□□□□ 0.38
NXF1-210ENST00000531579 CCL14Q16627 93 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 CHST3Q7LGC8 479 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 ANKRD35Q8N283 1001 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 NEK1Q96PY6 1258 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
NXF1-210ENST00000531579 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
NXF1-210ENST00000531579 PRC1O43663 620 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 IGHA2P01877 340 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
NXF1-210ENST00000531579 HSPA4P34932 840 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 LIFRP42702 1097 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
NXF1-210ENST00000531579 ZNF792Q3KQV3 632 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 CCDC174Q6PII3 467 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
NXF1-210ENST00000531579 KCNB2Q92953 911 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
NXF1-210ENST00000531579 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
NXF1-210ENST00000531579 ALAS1P13196 640 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
NXF1-210ENST00000531579 ANTXR2P58335 489 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 TROAPQ12815 778 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
NXF1-210ENST00000531579 U2AF1L4Q8WU68 220 aaKnown RBP17.42■□□□□ 0.38
NXF1-210ENST00000531579 MAML3Q96JK9 1138 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 MAF1Q9H063 256 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.38
NXF1-210ENST00000531579 RNF146Q9NTX7 359 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 FLRT1Q9NZU1 646 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 CCPG1Q9ULG6 757 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 PLXNB2O15031 1838 aa17.42■□□□□ 0.38
NXF1-210ENST00000531579 HTTP42858 3142 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 KLRF2D3W0D1 207 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 PGK2P07205 417 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 SNAP25P60880 206 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 TRIM32Q13049 653 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
NXF1-210ENST00000531579 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 NRBP1Q9UHY1 535 aa17.41■□□□□ 0.38
NXF1-210ENST00000531579 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
NXF1-210ENST00000531579 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 MSCO60682 206 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 TFRCP02786 760 aaKnown RBP17.4■□□□□ 0.38
NXF1-210ENST00000531579 CALM1P0DP23 149 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 CALM2P0DP24 149 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 CALM3P0DP25 149 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
NXF1-210ENST00000531579 TRAF1Q13077 416 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 GRM4Q14833 912 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 LY9Q9HBG7 655 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 HOMER2Q9NSB8 354 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 MAD2L2Q9UI95 211 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 PFASO15067 1338 aa17.4■□□□□ 0.38
NXF1-210ENST00000531579 SH2B2O14492 632 aaPredicted RBP17.39■□□□□ 0.37
NXF1-210ENST00000531579 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
NXF1-210ENST00000531579 DDAH1O94760 285 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 KIF5BP33176 963 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 CYP2C19P33261 490 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 SYNE3Q6ZMZ3 975 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 VAT1LQ9HCJ6 419 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 ZNF236Q9UL36 1845 aa17.39■□□□□ 0.37
NXF1-210ENST00000531579 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 PSMA5P28066 241 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 GNAQP50148 359 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 SGMS1Q86VZ5 419 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 ZNF654Q8IZM8 581 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 ANKLE1Q8NAG6 615 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 RGS22Q8NE09 1264 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 CTCFLQ8NI51 663 aaPredicted RBP17.38■□□□□ 0.37
NXF1-210ENST00000531579 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 JMJD4Q9H9V9 463 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 SENP2Q9HC62 589 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
NXF1-210ENST00000531579 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
NXF1-210ENST00000531579 CDC37Q16543 378 aaPredicted RBP17.37■□□□□ 0.37
NXF1-210ENST00000531579 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
NXF1-210ENST00000531579 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
NXF1-210ENST00000531579 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
NXF1-210ENST00000531579 NUP133Q8WUM0 1156 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms