RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 TPTE2Q6XPS3 522 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 LIMA1Q9UHB6 759 aaKnown RBP8.38□□□□□ -1.07
C11orf54-207ENST00000528288 SPATA31A5Q5VU36 1347 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 SPATA31A7Q8IWB4 1347 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 RAD21O60216 631 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 TM4SF1P30408 202 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PICALMQ13492 652 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 DYMQ7RTS9 669 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 SRGAP1Q7Z6B7 1085 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
C11orf54-207ENST00000528288 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PHLPP1O60346 1717 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PLCH1Q4KWH8 1693 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 STXBP3O00186 592 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 TXKP42681 527 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 ASIC1P78348 528 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 STK4Q13043 487 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 ANKRD20A12PQ8NF67 263 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 DRC1Q96MC2 740 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PIGSQ96S52 555 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 FUT8Q9BYC5 575 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PDE11AQ9HCR9 933 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 SLC39A2Q9NP94 309 aa8.38□□□□□ -1.07
C11orf54-207ENST00000528288 PDE4DQ08499 809 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 CYP26C1Q6V0L0 522 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 ADSSL1Q8N142 457 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 MB21D1Q8N884 522 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 SMCR8Q8TEV9 937 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 RABGGTAQ92696 567 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 COA7Q96BR5 231 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 MACROD2A1Z1Q3 448 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 SMCO2A6NFE2 343 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 KLRC4O43908 158 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 CALML3P27482 149 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 LONP1P36776 959 aaKnown RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 BTDP43251 543 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 VSNL1P62760 191 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 LRRC47Q8N1G4 583 aaKnown RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 PSMB7Q99436 277 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 CCNL1Q9UK58 526 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 RCCD1A6NED2 376 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 ZNF185O15231 689 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 NDUFA10O95299 355 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 PLEKP08567 350 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 RASA1P20936 1047 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 GRM4Q14833 912 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 LRRC41Q15345 812 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 SKIDA1Q1XH10 827 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 FKBP15Q5T1M5 1219 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 ANKRD40Q6AI12 368 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 CABP7Q86V35 215 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 TMTC1Q8IUR5 882 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 GSPT2Q8IYD1 628 aaKnown RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 ANKRD2Q9GZV1 360 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 NARFQ9UHQ1 456 aa8.37□□□□□ -1.07
C11orf54-207ENST00000528288 LUC7L2Q9Y383 392 aaKnown RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 COL16A1Q07092 1604 aaPredicted RBP8.37□□□□□ -1.07
C11orf54-207ENST00000528288 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 ATP1A1P05023 1023 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 KCTD19Q17RG1 926 aaPredicted RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 POTEDQ86YR6 584 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 GLIS3Q8NEA6 775 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 EYA3Q99504 573 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CDCA7Q9BWT1 371 aaPredicted RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 COL14A1Q05707 1796 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 FAM170AA1A519 330 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TRIM21P19474 475 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 HERVK_113P62684 666 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 SBK1Q52WX2 424 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 MXD3Q9BW11 206 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 NAA15Q9BXJ9 866 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CDK8P49336 464 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 HNRNPH2P55795 449 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TBC1D8BQ0IIM8 1120 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CCDC122Q5T0U0 273 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TEX11Q8IYF3 940 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CCDC155Q8N6L0 562 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TBCKQ8TEA7 893 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CEP95Q96GE4 821 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
C11orf54-207ENST00000528288 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 PLEKHA4Q9H4M7 779 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 KANSL2Q9H9L4 492 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms