RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 SEC24BO95487 1268 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 BMP8BP34820 402 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 MNX1P50219 401 aaPredicted RBP20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 TRAF1Q13077 416 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 ANKRD13CQ8N6S4 541 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 KIFC2Q96AC6 838 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 NUP88Q99567 741 aaPredicted RBP20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 PTPRFP10586 1907 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 ALPK3Q96L96 1907 aa20.48■□□□□ 0.87
PACSIN3-202ENST00000524509 VWA5AO00534 786 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 SLC25A27O95847 323 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 MAPK4P31152 587 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 ERVK-9P63128 1117 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 ERVK-24P63145 666 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 KCTD1Q719H9 257 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 ZNF654Q8IZM8 581 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 PAWRQ96IZ0 340 aaKnown RBP20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 GDF15Q99988 308 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 PAGR1Q9BTK6 254 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 RBPJLQ9UBG7 517 aa20.47■□□□□ 0.87
PACSIN3-202ENST00000524509 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 ATP2A1O14983 1001 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 TROAPQ12815 778 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 NECAB2Q7Z6G3 386 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 ATG4CQ96DT6 458 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 ALDH8A1Q9H2A2 487 aaPredicted RBP20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 PDRG1Q9NUG6 133 aa20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
PACSIN3-202ENST00000524509 SMARCA1P28370 1054 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 GRM4Q14833 912 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 Q6ZUG5 572 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 SHCBP1Q8NEM2 672 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 COA7Q96BR5 231 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 TEX13BQ9BXU2 312 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 AGXT2Q9BYV1 514 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 SLC38A10Q9HBR0 1119 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 FBXO28Q9NVF7 368 aa20.45■□□□□ 0.86
PACSIN3-202ENST00000524509 DOCK3Q8IZD9 2030 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 ZBTB43O43298 467 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 LRRC2Q9BYS8 371 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 MROH8Q9H579 483 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 FRMPD2Q68DX3 1309 aaPredicted RBP20.44■□□□□ 0.86
PACSIN3-202ENST00000524509 PALM3A6NDB9 673 aaPredicted RBP20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 STRNO43815 780 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 STAT3P40763 770 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 PLS1Q14651 629 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 TKFCQ3LXA3 575 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 APOA5Q6Q788 366 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 IVNS1ABPQ9Y6Y0 642 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 MYH4Q9Y623 1939 aa20.43■□□□□ 0.86
PACSIN3-202ENST00000524509 KLF18A0A0U1RQI7 1052 aa20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 DHX16O60231 1041 aaKnown RBP20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 FANCBQ8NB91 859 aa20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 DIS3LQ8TF46 1054 aaKnown RBP20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 BRF1Q92994 677 aa20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 MAD2L2Q9UI95 211 aa20.42■□□□□ 0.86
PACSIN3-202ENST00000524509 EVCP57679 992 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 TMEM132BQ14DG7 1078 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 LRIT3Q3SXY7 679 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 DEFB123Q8N688 67 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 MAF1Q9H063 256 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 TXNRD2Q9NNW7 524 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 BTBD7Q9P203 1132 aa20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
PACSIN3-202ENST00000524509 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 NEK4P51957 841 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 RABEP1Q15276 862 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 RTN1Q16799 776 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 TTBK2Q6IQ55 1244 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 MICU3Q86XE3 530 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 C7orf61Q8IZ16 206 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 CHST13Q8NET6 341 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 SOCS4Q8WXH5 440 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 ZNF274Q96GC6 653 aaPredicted RBP20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 TCEANC2Q96MN5 208 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 SENP2Q9HC62 589 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 SLC5A4Q9NY91 659 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 STXBP5LQ9Y2K9 1186 aa20.4■□□□□ 0.86
PACSIN3-202ENST00000524509 CNMDO75829 334 aa20.39■□□□□ 0.85
PACSIN3-202ENST00000524509 HMGCRP04035 888 aa20.39■□□□□ 0.85
PACSIN3-202ENST00000524509 ICAM1P05362 532 aa20.39■□□□□ 0.85
PACSIN3-202ENST00000524509 CPA1P15085 419 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms