RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 DEFB118Q96PH6 123 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
PABPC1-223ENST00000523636 NAV2Q8IVL1 2488 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 HEG1Q9ULI3 1381 aa6.68□□□□□ -1.34
PABPC1-223ENST00000523636 FAM208BQ5VWN6 2430 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 RNMTO43148 476 aaKnown RBP6.67□□□□□ -1.34
PABPC1-223ENST00000523636 TFRCP02786 760 aaKnown RBP6.67□□□□□ -1.34
PABPC1-223ENST00000523636 PRMT2P55345 433 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 COL9A2Q14055 689 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-223ENST00000523636 ZNF438Q7Z4V0 828 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 RPGRQ92834 1020 aaKnown RBP6.67□□□□□ -1.34
PABPC1-223ENST00000523636 NAP1L5Q96NT1 182 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-223ENST00000523636 MYOZ2Q9NPC6 264 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 HCN2Q9UL51 889 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 UBN2Q6ZU65 1347 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 LRRC37A2A6NM11 1700 aa6.67□□□□□ -1.34
PABPC1-223ENST00000523636 TERTO14746 1132 aaKnown RBP6.66□□□□□ -1.34
PABPC1-223ENST00000523636 ECE2O60344 883 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 CD33P20138 364 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SMAD3P84022 425 aaKnown RBP6.66□□□□□ -1.34
PABPC1-223ENST00000523636 TFF2Q03403 129 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 ARHGEF6Q15052 776 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SHHQ15465 462 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 TAF1CQ15572 869 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-223ENST00000523636 AMOTQ4VCS5 1084 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 C1orf141Q5JVX7 400 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 ARMC9Q7Z3E5 817 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SP8Q8IXZ3 490 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SNX29Q8TEQ0 813 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 RBM17Q96I25 401 aaKnown RBP6.66□□□□□ -1.34
PABPC1-223ENST00000523636 PLCD4Q9BRC7 762 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 DNAJC25Q9H1X3 360 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 ELP3Q9H9T3 547 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 AVENQ9NQS1 362 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-223ENST00000523636 POLKQ9UBT6 870 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 GABRQQ9UN88 632 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
PABPC1-223ENST00000523636 SPTBN2O15020 2390 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 MAFGO15525 162 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 TLR2O60603 784 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 TCF3P15923 654 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 TNNT2P45379 298 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-223ENST00000523636 KCNQ1P51787 676 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 PRKCZQ05513 592 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 ADGRE1Q14246 886 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 C17orf99Q6UX52 265 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 TREML4Q6UXN2 200 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 FBXO33Q7Z6M2 555 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 PMEPA1Q969W9 287 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 NIF3L1Q9GZT8 377 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
PABPC1-223ENST00000523636 ABI2Q9NYB9 513 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-223ENST00000523636 NSFL1CQ9UNZ2 370 aaKnown RBP6.65□□□□□ -1.34
PABPC1-223ENST00000523636 ADGRA2Q96PE1 1338 aa6.65□□□□□ -1.35
PABPC1-223ENST00000523636 PLXNA3P51805 1871 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PRRC2BQ5JSZ5 2229 aaKnown RBP6.64□□□□□ -1.35
PABPC1-223ENST00000523636 WDFY3Q8IZQ1 3526 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 A6NHS1 94 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PRR33A8MZF0 331 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PI4K2BG5E9Z4 385 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 WNT10BO00744 389 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
PABPC1-223ENST00000523636 ELNP15502 786 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PSMC4P43686 418 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 ANAPC15P60006 121 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
PABPC1-223ENST00000523636 LRRC26Q2I0M4 334 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 OTUD7BQ6GQQ9 843 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PODNQ7Z5L7 613 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 RAET1EQ8TD07 263 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 PNMA5Q96PV4 448 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 SLC30A3Q99726 388 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 POLLQ9UGP5 575 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 USP16Q9Y5T5 823 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 MYPNQ86TC9 1320 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 FRYQ5TBA9 3013 aa6.64□□□□□ -1.35
PABPC1-223ENST00000523636 TPD52L2O43399 206 aaKnown RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 ROCK2O75116 1388 aaKnown RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 SASH3O75995 380 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 NTSR2O95665 410 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 HOXD8P13378 290 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 MX2P20592 715 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 SOX18P35713 384 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 UBXN2AP68543 259 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 CTBSQ01459 385 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 NFX1Q12986 1120 aaKnown RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 GAS6Q14393 721 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 HSP90AB4PQ58FF6 505 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 ZNF468Q5VIY5 522 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 TTC39BQ5VTQ0 682 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-223ENST00000523636 SUSD4Q5VX71 490 aa6.63□□□□□ -1.35
PABPC1-223ENST00000523636 ECM29Q5VYK3 1845 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms