RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 VWA5AO00534 786 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 SRGAP3O43295 1099 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 PFKMP08237 780 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 SNRNP48Q6IEG0 339 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 MAMDC4Q6UXC1 1216 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 SSH1Q8WYL5 1049 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 ABHD16BQ9H3Z7 469 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 ARHGEF10LQ9HCE6 1279 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 RIPK3Q9Y572 518 aa13.44□□□□□ -0.26
CTNNA1-234ENST00000522227 WDR46O15213 610 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 DYNC1LI2O43237 492 aaPredicted RBP13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 TNFAIP2Q03169 654 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 ICA1Q05084 483 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 FSCN1Q16658 493 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 TLK2Q86UE8 772 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 MEIS3Q99687 375 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 AP5M1Q9H0R1 490 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
CTNNA1-234ENST00000522227 CABYRO75952 493 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 CYP2D6P10635 497 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 AKR1B1P15121 316 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 ZP2Q05996 745 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 FAM83BQ5T0W9 1011 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 CPXCR1Q8N123 301 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 PPP1R9AQ9ULJ8 1098 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 TMX2Q9Y320 296 aa13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-234ENST00000522227 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 IRS1P35568 1242 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 COPB2P35606 906 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 KCNJ6P48051 423 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 GABPAQ06546 454 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 TCF15Q12870 199 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 ANKRD35Q8N283 1001 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 DYNLL2Q96FJ2 89 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 FGD4Q96M96 766 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 CRBNQ96SW2 442 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 CFAP54Q96N23 3096 aa13.41□□□□□ -0.26
CTNNA1-234ENST00000522227 TNKSO95271 1327 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 ZEB2O60315 1214 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.263e-10■□□□□ 10.3
CTNNA1-234ENST00000522227 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 RETREG2Q8NC44 543 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
CTNNA1-234ENST00000522227 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 DEFB103AP81534 67 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 CLUL1Q15846 466 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 PUS10Q3MIT2 529 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-234ENST00000522227 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 SMPD1P17405 629 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 ADHFE1Q8IWW8 467 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 PDGFCQ9NRA1 345 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 GNEQ9Y223 722 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-234ENST00000522227 ZFHX2Q9C0A1 2572 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 LINC01553A4QN01 128 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 MYL3P08590 195 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 CHMP4BP1P59074 171 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 ERVK-21P61565 698 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms