RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TOB1P50616 345 aaPredicted RBP20.73■□□□□ 0.91
SDC2-202ENST00000518385 UBASH3AP57075 661 aa20.73■□□□□ 0.91
SDC2-202ENST00000518385 ZNF280AP59817 542 aaPredicted RBP20.73■□□□□ 0.91
SDC2-202ENST00000518385 RESP18Q5W5W9 173 aa20.73■□□□□ 0.91
SDC2-202ENST00000518385 SLC44A5Q8NCS7 719 aa20.73■□□□□ 0.91
SDC2-202ENST00000518385 ZBED3Q96IU2 234 aaPredicted RBP20.73■□□□□ 0.91
SDC2-202ENST00000518385 VPS54Q9P1Q0 977 aa20.73■□□□□ 0.91
SDC2-202ENST00000518385 SBF1O95248 1867 aa20.73■□□□□ 0.91
SDC2-202ENST00000518385 ENTPD3O75355 529 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 HLA-DOAP06340 250 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 CACNB3P54284 484 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 ZFPM1Q8IX07 1006 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 GPR161Q8N6U8 529 aaKnown RBP20.72■□□□□ 0.91
SDC2-202ENST00000518385 TRIML1Q8N9V2 468 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 EHD4Q9H223 541 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 DHX36Q9H2U1 1008 aaKnown RBP20.72■□□□□ 0.91
SDC2-202ENST00000518385 MAD2L2Q9UI95 211 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 STX8Q9UNK0 236 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 TRIM75PA6NK02 468 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 STX10O60499 249 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 PTPREP23469 700 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
SDC2-202ENST00000518385 GMPSP49915 693 aaPredicted RBP20.72■□□□□ 0.91
SDC2-202ENST00000518385 CLCN6P51797 869 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 MYOZ2Q9NPC6 264 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 ZNF70Q9UC06 446 aaPredicted RBP20.72■□□□□ 0.91
SDC2-202ENST00000518385 FHOD1Q9Y613 1164 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 GJA3Q9Y6H8 435 aa20.72■□□□□ 0.91
SDC2-202ENST00000518385 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 TADA3O75528 432 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 CYP2C19P33261 490 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 NR5A1Q13285 461 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 SPDYE2Q495Y8 402 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 ARHGAP29Q52LW3 1261 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 MSL3Q8N5Y2 521 aaKnown RBP20.71■□□□□ 0.91
SDC2-202ENST00000518385 CCDC148Q8NFR7 591 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 TNFRSF25Q93038 417 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 CCDC34Q96HJ3 373 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 CABP5Q9NP86 173 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 SERPINB13Q9UIV8 391 aa20.71■□□□□ 0.91
SDC2-202ENST00000518385 SRPRBQ9Y5M8 271 aaKnown RBP20.71■□□□□ 0.91
SDC2-202ENST00000518385 POTEB2H3BUK9 544 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 SERPINC1P01008 464 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 PNMA6AP0CW24 399 aaPredicted RBP20.7■□□□□ 0.9
SDC2-202ENST00000518385 NLRP5P59047 1200 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 TCP10Q12799 353 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 GPS2Q13227 327 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 ERCC6LQ2NKX8 1250 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 KANK3Q6NY19 840 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 TRIM65Q6PJ69 517 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 OXER1Q8TDS5 423 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 CCDC17Q96LX7 622 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 ZNF446Q9NWS9 450 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 TMOD2Q9NZR1 351 aa20.7■□□□□ 0.9
SDC2-202ENST00000518385 SHTN1A0MZ66 631 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 FKBP1CQ5VVH2 108 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 SHC4Q6S5L8 630 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 SH3BP5LQ7L8J4 393 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 TXLNBQ8N3L3 684 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 MLKLQ8NB16 471 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 SHISA4Q96DD7 197 aa20.69■□□□□ 0.9
SDC2-202ENST00000518385 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
SDC2-202ENST00000518385 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 WNT10BO00744 389 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 PARP1P09874 1014 aaKnown RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 SLC20A2Q08357 652 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 NPY5RQ15761 445 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 REXO1L1PQ8IX06 675 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 DAGLBQ8NCG7 672 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 FERMT2Q96AC1 680 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 PI4KBQ9UBF8 816 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 FBXO2Q9UK22 296 aaPredicted RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 DDTLA6NHG4 134 aaPredicted RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 TUBBP07437 444 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 TBX2Q13207 712 aaPredicted RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 FOXP4Q8IVH2 680 aaPredicted RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 GPC2Q8N158 579 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 NAA15Q9BXJ9 866 aaKnown RBP20.68■□□□□ 0.9
SDC2-202ENST00000518385 UBXN6Q9BZV1 441 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 MTMR4Q9NYA4 1195 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 PCDHB6Q9Y5E3 794 aa20.68■□□□□ 0.9
SDC2-202ENST00000518385 COL2A1P02458 1487 aaPredicted RBP20.67■□□□□ 0.9
SDC2-202ENST00000518385 CLRN2A0PK11 232 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 KLRF2D3W0D1 207 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 STAG2Q8N3U4 1231 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
SDC2-202ENST00000518385 FAM151AQ8WW52 585 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 RABGGTAQ92696 567 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 KCNH3Q9ULD8 1083 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 PCDHA4Q9UN74 947 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 ATRNL1Q5VV63 1379 aa20.67■□□□□ 0.9
SDC2-202ENST00000518385 hCG_1642624A0A1W2PR95 340 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 TCP10L2B9ZVM9 353 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
SDC2-202ENST00000518385 CASQ1P31415 396 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms