RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NPR3P17342 541 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 INPP5BP32019 993 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 EPHA4P54764 986 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 VPS53Q5VIR6 699 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CASC1Q6TDU7 716 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ANKRD13AQ8IZ07 590 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ZKSCAN4Q969J2 545 aaPredicted RBP6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 KLRG1Q96E93 195 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 WRNIP1Q96S55 665 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 NAPBQ9H115 298 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 SERPINB13Q9UIV8 391 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 CSADQ9Y600 493 aa6.9□□□□□ -1.3
SCARNA6.1-201ENST00000516989 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.31
SCARNA6.1-201ENST00000516989 A0A1W2PRU2 124 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 LILRA1O75019 489 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 FGAP02671 866 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ECE1P42892 770 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 MAP3K10Q02779 954 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 MAP3K11Q16584 847 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 C12orf60Q5U649 245 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CYP4F22Q6NT55 531 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 GIMAP6Q6P9H5 292 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ZNF589Q86UQ0 364 aaPredicted RBP6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 DYNLL2Q96FJ2 89 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CLMNQ96JQ2 1002 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SAP130Q9H0E3 1048 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CCDC171Q6TFL3 1326 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RFX7Q2KHR2 1363 aa6.89□□□□□ -1.31
SCARNA6.1-201ENST00000516989 AK9Q5TCS8 1911 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ATRNL1Q5VV63 1379 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PHF20L1A8MW92 1017 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SMIM22K7EJ46 135 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 MPHOSPH10O00566 681 aaKnown RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SGSM2O43147 1006 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CTNND1O60716 968 aaKnown RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CDC45O75419 566 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 GNRH1P01148 92 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 MPSTP25325 297 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CDK8P49336 464 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 VGLL4Q14135 290 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CERKLQ49MI3 558 aaPredicted RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PPP1R18Q6NYC8 613 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 C16orf46Q6P387 395 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RGL4Q8IZJ4 473 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CAPNS2Q96L46 248 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CABP5Q9NP86 173 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ZNF112Q9UJU3 913 aa6.88□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RAD50Q92878 1312 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 WDR33Q9C0J8 1336 aaKnown RBP6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 A6NJY4 79 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ZNF213O14771 459 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SIAH2O43255 324 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 AOC2O75106 756 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PRDM1O75626 825 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 GDF11O95390 407 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 CAP2P40123 477 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 VEGFBP49765 207 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SMTNP53814 917 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 HAND2P61296 217 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 FOXK2Q01167 660 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 GABPAQ06546 454 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 PPARAQ07869 468 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RRP1BQ14684 758 aaKnown RBP6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ALX1Q15699 326 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ERO1BQ86YB8 467 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SCYL3Q8IZE3 742 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ZNF444Q8N0Y2 327 aaPredicted RBP6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 SLC44A5Q8NCS7 719 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 HHIPL1Q96JK4 782 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 EHD4Q9H223 541 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 IL25Q9H293 177 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
SCARNA6.1-201ENST00000516989 EPB41L4AQ9HCS5 686 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms