RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 SLF1Q9BQI6 1058 aa23.3■■□□□ 1.32
SMIM20-201ENST00000506197 UBA5Q9GZZ9 404 aa23.3■■□□□ 1.32
SMIM20-201ENST00000506197 FAM217BQ9NTX9 383 aaPredicted RBP23.3■■□□□ 1.32
SMIM20-201ENST00000506197 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
SMIM20-201ENST00000506197 COL11A1P12107 1806 aaPredicted RBP23.29■■□□□ 1.32
SMIM20-201ENST00000506197 POTEFA5A3E0 1075 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 PSMC4P43686 418 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 BTNL9Q6UXG8 535 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 NBPF11Q86T75 865 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 CCDC82Q8N4S0 544 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 KIFC2Q96AC6 838 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 FBXO28Q9NVF7 368 aa23.29■■□□□ 1.32
SMIM20-201ENST00000506197 BCRP11274 1271 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 SMARCA1P28370 1054 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 CTGFP29279 349 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 PRMT2P55345 433 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 COG2Q14746 738 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 CMTR1Q8N1G2 835 aaKnown RBP23.28■■□□□ 1.32
SMIM20-201ENST00000506197 SRBD1Q8N5C6 995 aaKnown RBP23.28■■□□□ 1.32
SMIM20-201ENST00000506197 PRPF38AQ8NAV1 312 aaKnown RBP23.28■■□□□ 1.32
SMIM20-201ENST00000506197 TRIM47Q96LD4 638 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 SPZ1Q9BXG8 430 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 CPVLQ9H3G5 476 aa23.28■■□□□ 1.32
SMIM20-201ENST00000506197 FMNL1O95466 1100 aaPredicted RBP23.27■■□□□ 1.32
SMIM20-201ENST00000506197 AKAP17AQ02040 695 aaKnown RBP23.27■■□□□ 1.32
SMIM20-201ENST00000506197 ADGRF4Q8IZF3 695 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 ASCC2Q9H1I8 757 aaPredicted RBP23.27■■□□□ 1.32
SMIM20-201ENST00000506197 VAT1LQ9HCJ6 419 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 HOXC10Q9NYD6 342 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 PPP1R9AQ9ULJ8 1098 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 PRR12Q9ULL5 1215 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 CTDP1Q9Y5B0 961 aaPredicted RBP23.27■■□□□ 1.32
SMIM20-201ENST00000506197 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
SMIM20-201ENST00000506197 HSP90AA1P07900 732 aaKnown RBP23.26■■□□□ 1.31
SMIM20-201ENST00000506197 IFNAR1P17181 557 aa23.26■■□□□ 1.31
SMIM20-201ENST00000506197 TRIM22Q8IYM9 498 aa23.26■■□□□ 1.31
SMIM20-201ENST00000506197 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
SMIM20-201ENST00000506197 LLPHQ9BRT6 129 aaKnown RBP23.26■■□□□ 1.31
SMIM20-201ENST00000506197 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
SMIM20-201ENST00000506197 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
SMIM20-201ENST00000506197 FDX1P10109 184 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 HOXD10P28358 340 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 DSG3P32926 999 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 SSRP1Q08945 709 aaKnown RBP23.25■■□□□ 1.31
SMIM20-201ENST00000506197 ST3GAL1Q11201 340 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 NTRK3Q16288 839 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 SH3TC2Q8TF17 1288 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 RRP36Q96EU6 259 aaKnown RBP23.25■■□□□ 1.31
SMIM20-201ENST00000506197 SLC26A6Q9BXS9 759 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 RIOX1Q9H6W3 641 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 RBM27Q9P2N5 1060 aaKnown RBP23.25■■□□□ 1.31
SMIM20-201ENST00000506197 SEC63Q9UGP8 760 aaKnown RBP23.25■■□□□ 1.31
SMIM20-201ENST00000506197 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.25■■□□□ 1.31
SMIM20-201ENST00000506197 A0A0G2JMZ2 1700 aa23.25■■□□□ 1.31
SMIM20-201ENST00000506197 ZBED4O75132 1171 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 FCGRTP55899 365 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 CUL4AQ13619 759 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 HOMER1Q86YM7 354 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 PHKBQ93100 1093 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 ATG4CQ96DT6 458 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 TMEM106CQ9BVX2 250 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 RNF26Q9BY78 433 aaPredicted RBP23.24■■□□□ 1.31
SMIM20-201ENST00000506197 JMJD4Q9H9V9 463 aa23.24■■□□□ 1.31
SMIM20-201ENST00000506197 SPDYE16A6NNV3 312 aaPredicted RBP23.23■■□□□ 1.31
SMIM20-201ENST00000506197 CYTH3O43739 400 aa23.23■■□□□ 1.31
SMIM20-201ENST00000506197 HERVK_113P62684 666 aa23.23■■□□□ 1.31
SMIM20-201ENST00000506197 FUT2Q10981 343 aa23.23■■□□□ 1.31
SMIM20-201ENST00000506197 NSUN7Q8NE18 718 aaKnown RBP23.23■■□□□ 1.31
SMIM20-201ENST00000506197 RAET1EQ8TD07 263 aa23.23■■□□□ 1.31
SMIM20-201ENST00000506197 GTF3C2Q8WUA4 911 aaPredicted RBP23.23■■□□□ 1.31
SMIM20-201ENST00000506197 P2RX7Q99572 595 aaKnown RBP23.23■■□□□ 1.31
SMIM20-201ENST00000506197 DOCK3Q8IZD9 2030 aa23.23■■□□□ 1.31
SMIM20-201ENST00000506197 PTPDC1A2A3K4 754 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 PPFIA3O75145 1194 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 CTDNEP1O95476 244 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 MYCP01106 439 aaPredicted RBP23.22■■□□□ 1.31
SMIM20-201ENST00000506197 CDC37Q16543 378 aaPredicted RBP23.22■■□□□ 1.31
SMIM20-201ENST00000506197 SLC35G1Q2M3R5 365 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 PIGSQ96S52 555 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
SMIM20-201ENST00000506197 DAXXQ9UER7 740 aaPredicted RBP23.22■■□□□ 1.31
SMIM20-201ENST00000506197 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
SMIM20-201ENST00000506197 STK36Q9NRP7 1315 aa23.22■■□□□ 1.31
SMIM20-201ENST00000506197 VWA5AO00534 786 aa23.21■■□□□ 1.31
SMIM20-201ENST00000506197 PRPF3O43395 683 aaKnown RBP23.21■■□□□ 1.31
SMIM20-201ENST00000506197 EN2P19622 333 aaPredicted RBP23.21■■□□□ 1.31
SMIM20-201ENST00000506197 SNAP25P60880 206 aa23.21■■□□□ 1.31
SMIM20-201ENST00000506197 HMGN5P82970 282 aaKnown RBP23.21■■□□□ 1.31
SMIM20-201ENST00000506197 MB21D1Q8N884 522 aa23.21■■□□□ 1.31
SMIM20-201ENST00000506197 SLC38A10Q9HBR0 1119 aa23.21■■□□□ 1.31
SMIM20-201ENST00000506197 SMC3Q9UQE7 1217 aa23.21■■□□□ 1.31
SMIM20-201ENST00000506197 PNMA6FA0A0J9YX94 578 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 hCG_1642624A0A1W2PR95 340 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 ZBTB5O15062 677 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 JAK2O60674 1132 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 PRKCZQ05513 592 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 QRICH1Q2TAL8 776 aa23.2■■□□□ 1.3
SMIM20-201ENST00000506197 PRPF38BQ5VTL8 546 aaKnown RBP23.2■■□□□ 1.3
SMIM20-201ENST00000506197 CCDC174Q6PII3 467 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms