RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ZHX1Q9UKY1 873 aaPredicted RBP23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 TACC3Q9Y6A5 838 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 A0A0D9SFI3 127 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 MOXD2PA6NHM9 499 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 TRIM6-TRIM34B2RNG4 842 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 PCP11498 1178 aaKnown RBP23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 DEFB123Q8N688 67 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 DCAF4Q8WV16 495 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 SPC25Q9HBM1 224 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 INCENPQ9NQS7 918 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 PRDM5Q9NQX1 630 aaPredicted RBP23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 PDLIM7Q9NR12 457 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 TCP11L1Q9NUJ3 509 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 ZNF536O15090 1300 aa23.59■■□□□ 1.37
UBE2D3-220ENST00000505307 A0A1W2PQ45 241 aaPredicted RBP23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 A0A1W2PQY0 241 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 POTEB2H3BUK9 544 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 NMT2O60551 498 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 HSPD1P10809 573 aaKnown RBP23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 TLE2Q04725 743 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 KCTD1Q719H9 257 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 ARMCX2Q7L311 632 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 KLHDC9Q8NEP7 349 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 TOMM22Q9NS69 142 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 HOMER2Q9NSB8 354 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 RNF146Q9NTX7 359 aa23.58■■□□□ 1.37
UBE2D3-220ENST00000505307 SYNRGQ9UMZ2 1314 aa23.58■■□□□ 1.36
UBE2D3-220ENST00000505307 CST5P28325 142 aaPredicted RBP23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 NMIQ13287 307 aaPredicted RBP23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 FAM133AQ8N9E0 248 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 PCSK9Q8NBP7 692 aaKnown RBP23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 FGD4Q96M96 766 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 AGBL1Q96MI9 1066 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 TRERF1Q96PN7 1200 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 OSBPL3Q9H4L5 887 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 PRR12Q9ULL5 1215 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 CCDC171Q6TFL3 1326 aa23.57■■□□□ 1.36
UBE2D3-220ENST00000505307 ASB14A6NK59 587 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 TOP1P11387 765 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 NT5C2P49902 561 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 ACLYP53396 1101 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 CHD1LQ86WJ1 897 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 RILPL2Q969X0 211 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 TOX2Q96NM4 488 aa23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 A1CFQ9NQ94 594 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-220ENST00000505307 CLTBP09497 229 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 ALAS1P13196 640 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 CCDC96Q2M329 555 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 CCDC144BQ3MJ40 725 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 RRP12Q5JTH9 1297 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 FAM109BQ6ICB4 259 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 CCSAPQ6IQ19 270 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 BTNL9Q6UXG8 535 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 CCDC144CPQ8IYA2 1237 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 BADQ92934 168 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 LENG1Q96BZ8 264 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 TTC14Q96N46 770 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 RNF41Q9H4P4 317 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 STARD7Q9NQZ5 370 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 PNMA2Q9UL42 364 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 ELP1O95163 1332 aa23.55■■□□□ 1.36
UBE2D3-220ENST00000505307 TRIM43BA6NCK2 446 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 GJA9P57773 515 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 CNTN2Q02246 1040 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 NUCB1Q02818 461 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 KCNA10Q16322 511 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 B4GALNT3Q6L9W6 998 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 MFSD6Q6ZSS7 791 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 Q7L0L9 218 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 ANKRD33Q7Z3H0 272 aa23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 ZNF589Q86UQ0 364 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 TRIM43Q96BQ3 446 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 UPF3AQ9H1J1 476 aaKnown RBP23.54■■□□□ 1.36
UBE2D3-220ENST00000505307 DCDC2CA8MYV0 355 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 KIAA0355O15063 1070 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 ICAM1P05362 532 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 C6orf222P0C671 652 aaPredicted RBP23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 SDSP20132 328 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 CCDC174Q6PII3 467 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 SH3RF1Q7Z6J0 888 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 PLEKHM2Q8IWE5 1019 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 GLT1D1Q96MS3 346 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 TMEM47Q9BQJ4 181 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 MTMR10Q9NXD2 777 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 CCPG1Q9ULG6 757 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 LTBP2Q14767 1821 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 MROH7Q68CQ1 1323 aa23.53■■□□□ 1.36
UBE2D3-220ENST00000505307 PQBP1O60828 265 aaKnown RBP23.52■■□□□ 1.36
UBE2D3-220ENST00000505307 NKX3-2P78367 333 aa23.52■■□□□ 1.36
UBE2D3-220ENST00000505307 KATNBL1Q9H079 304 aa23.52■■□□□ 1.36
UBE2D3-220ENST00000505307 RANBP17Q9H2T7 1088 aaKnown RBP23.52■■□□□ 1.36
UBE2D3-220ENST00000505307 MTMR7Q9Y216 660 aa23.52■■□□□ 1.36
UBE2D3-220ENST00000505307 SOWAHBA6NEL2 793 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 HIP1O00291 1037 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 RAG1P15918 1043 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 SYDE2Q5VT97 1194 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 TMEM39AQ9NV64 488 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms