RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 C1orf53Q5VUE5 145 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 CHMP4CQ96CF2 233 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 ACAD9Q9H845 621 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 TCP11L1Q9NUJ3 509 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 FAM184BQ9ULE4 1060 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 PHF24Q9UPV7 400 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 ATP11BQ9Y2G3 1177 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 ZNF536O15090 1300 aa23.3■■□□□ 1.32
SFXN1-203ENST00000502393 PCP11498 1178 aaKnown RBP23.29■■□□□ 1.32
SFXN1-203ENST00000502393 MDM2Q00987 491 aaPredicted RBP23.29■■□□□ 1.32
SFXN1-203ENST00000502393 LRIT3Q3SXY7 679 aa23.29■■□□□ 1.32
SFXN1-203ENST00000502393 RRP12Q5JTH9 1297 aaKnown RBP23.29■■□□□ 1.32
SFXN1-203ENST00000502393 DCAF4Q8WV16 495 aa23.29■■□□□ 1.32
SFXN1-203ENST00000502393 AGBL1Q96MI9 1066 aa23.29■■□□□ 1.32
SFXN1-203ENST00000502393 LBHD1Q9BQE6 289 aaPredicted RBP23.29■■□□□ 1.32
SFXN1-203ENST00000502393 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
SFXN1-203ENST00000502393 PGK1P00558 417 aa23.28■■□□□ 1.32
SFXN1-203ENST00000502393 TOP1P11387 765 aaKnown RBP23.28■■□□□ 1.32
SFXN1-203ENST00000502393 FERMT2Q96AC1 680 aa23.28■■□□□ 1.32
SFXN1-203ENST00000502393 LRCH3Q96II8 777 aa23.28■■□□□ 1.32
SFXN1-203ENST00000502393 ABHD16BQ9H3Z7 469 aa23.28■■□□□ 1.32
SFXN1-203ENST00000502393 PRR12Q9ULL5 1215 aa23.28■■□□□ 1.32
SFXN1-203ENST00000502393 SMCHD1A6NHR9 2005 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 HAND2P61296 217 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 ACVR2BQ13705 512 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 AKNAD1Q5T1N1 836 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 GPR153Q6NV75 609 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 MFSD6Q6ZSS7 791 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 FGD4Q96M96 766 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 TRERF1Q96PN7 1200 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 RNF146Q9NTX7 359 aa23.27■■□□□ 1.32
SFXN1-203ENST00000502393 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
SFXN1-203ENST00000502393 ZHX1Q9UKY1 873 aaPredicted RBP23.27■■□□□ 1.32
SFXN1-203ENST00000502393 POTEB2H3BUK9 544 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 HIP1O00291 1037 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 ADAMTS4O75173 837 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 CCDC96Q2M329 555 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 TRIM60Q495X7 471 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 TMEM47Q9BQJ4 181 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 TSEN34Q9BSV6 310 aaKnown RBP23.26■■□□□ 1.31
SFXN1-203ENST00000502393 RNF41Q9H4P4 317 aaPredicted RBP23.26■■□□□ 1.31
SFXN1-203ENST00000502393 MTMR7Q9Y216 660 aa23.26■■□□□ 1.31
SFXN1-203ENST00000502393 DUSP11O75319 330 aaKnown RBP23.25■■□□□ 1.31
SFXN1-203ENST00000502393 ALAS1P13196 640 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 CCDC174Q6PII3 467 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
SFXN1-203ENST00000502393 BTNL9Q6UXG8 535 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 ARMCX2Q7L311 632 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 RASGRP2Q7LDG7 609 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 FAM133AQ8N9E0 248 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 LENG1Q96BZ8 264 aaPredicted RBP23.25■■□□□ 1.31
SFXN1-203ENST00000502393 TTC14Q96N46 770 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 A1CFQ9NQ94 594 aaKnown RBP23.25■■□□□ 1.31
SFXN1-203ENST00000502393 DIAPH3Q9NSV4 1193 aa23.25■■□□□ 1.31
SFXN1-203ENST00000502393 NT5C2P49902 561 aa23.24■■□□□ 1.31
SFXN1-203ENST00000502393 CNTN2Q02246 1040 aa23.24■■□□□ 1.31
SFXN1-203ENST00000502393 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
SFXN1-203ENST00000502393 KLHDC9Q8NEP7 349 aa23.24■■□□□ 1.31
SFXN1-203ENST00000502393 SUPT16HQ9Y5B9 1047 aaKnown RBP23.24■■□□□ 1.31
SFXN1-203ENST00000502393 SYNRGQ9UMZ2 1314 aa23.24■■□□□ 1.31
SFXN1-203ENST00000502393 A0A1W2PQ45 241 aaPredicted RBP23.23■■□□□ 1.31
SFXN1-203ENST00000502393 A0A1W2PQY0 241 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 MOXD2PA6NHM9 499 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 ZNF213O14771 459 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 ICAM1P05362 532 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 SNAP25P60880 206 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 TBC1D10CQ8IV04 446 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 ESR2Q92731 530 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 RANBP17Q9H2T7 1088 aaKnown RBP23.23■■□□□ 1.31
SFXN1-203ENST00000502393 PRDM5Q9NQX1 630 aaPredicted RBP23.23■■□□□ 1.31
SFXN1-203ENST00000502393 CCPG1Q9ULG6 757 aa23.23■■□□□ 1.31
SFXN1-203ENST00000502393 ASB14A6NK59 587 aa23.22■■□□□ 1.31
SFXN1-203ENST00000502393 CCDC144BQ3MJ40 725 aa23.22■■□□□ 1.31
SFXN1-203ENST00000502393 TTBK2Q6IQ55 1244 aa23.22■■□□□ 1.31
SFXN1-203ENST00000502393 NUP133Q8WUM0 1156 aa23.22■■□□□ 1.31
SFXN1-203ENST00000502393 PDLIM7Q9NR12 457 aa23.22■■□□□ 1.31
SFXN1-203ENST00000502393 PDHBP11177 359 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 CST5P28325 142 aaPredicted RBP23.21■■□□□ 1.31
SFXN1-203ENST00000502393 SLC16A2P36021 539 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 ACLYP53396 1101 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 TLE2Q04725 743 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 KCNA10Q16322 511 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 MUM1L1Q5H9M0 696 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 SYDE2Q5VT97 1194 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 CCSAPQ6IQ19 270 aaPredicted RBP23.21■■□□□ 1.31
SFXN1-203ENST00000502393 KATNBL1Q9H079 304 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 SPC25Q9HBM1 224 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 CYP39A1Q9NYL5 469 aa23.21■■□□□ 1.31
SFXN1-203ENST00000502393 FRMPD2Q68DX3 1309 aaPredicted RBP23.2■■□□□ 1.3
SFXN1-203ENST00000502393 SOWAHBA6NEL2 793 aa23.2■■□□□ 1.3
SFXN1-203ENST00000502393 PCSK9Q8NBP7 692 aaKnown RBP23.2■■□□□ 1.3
SFXN1-203ENST00000502393 DSCC1Q9BVC3 393 aa23.2■■□□□ 1.3
SFXN1-203ENST00000502393 GPCPD1Q9NPB8 672 aa23.2■■□□□ 1.3
SFXN1-203ENST00000502393 STARD7Q9NQZ5 370 aa23.2■■□□□ 1.3
SFXN1-203ENST00000502393 NEDD4P46934 1319 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 TRIM43BA6NCK2 446 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 ADCY6O43306 1168 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 C6orf222P0C671 652 aaPredicted RBP23.19■■□□□ 1.3
SFXN1-203ENST00000502393 SNHG28P0DPA3 235 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 GJA9P57773 515 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms