RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 DESI2Q9BSY9 194 aa10.96□□□□□ -0.66
TSC1-207ENST00000493467 BSDC1Q9NW68 430 aaPredicted RBP10.96□□□□□ -0.66
TSC1-207ENST00000493467 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.66
TSC1-207ENST00000493467 ABCF2Q9UG63 623 aa10.96□□□□□ -0.66
TSC1-207ENST00000493467 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.66
TSC1-207ENST00000493467 LOC102724428A0A0B4J2F2 783 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 LRRC10BA6NIK2 292 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 SIK1P57059 783 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
TSC1-207ENST00000493467 ITPK1Q13572 414 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 TRIM14Q14142 442 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
TSC1-207ENST00000493467 CLEC4GQ6UXB4 293 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 IQUBQ8NA54 791 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 CCDC12Q8WUD4 166 aaPredicted RBP10.95□□□□□ -0.66
TSC1-207ENST00000493467 LRRN4Q8WUT4 740 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 IQSEC3Q9UPP2 1182 aaPredicted RBP10.95□□□□□ -0.66
TSC1-207ENST00000493467 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
TSC1-207ENST00000493467 SMIM22K7EJ46 135 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 ATP9BO43861 1147 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 TBC1D8O95759 1140 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 SCG2P13521 617 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 GYG1P46976 350 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 TUBB4BP68371 445 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 MTF1Q14872 753 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 PFKFB3Q16875 520 aaPredicted RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 SBK1Q52WX2 424 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 ARL6IP4Q66PJ3 421 aaKnown RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 ST7Q9NRC1 585 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 TTF2Q9UNY4 1162 aaKnown RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 CCDC66A2RUB6 948 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 GYPCP04921 128 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 STX17P56962 302 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 KARSQ15046 597 aaKnown RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 ZNF174Q15697 407 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 TEX35Q5T0J7 233 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 KLHL10Q6JEL2 608 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 FBXO33Q7Z6M2 555 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 SRBD1Q8N5C6 995 aaKnown RBP10.94□□□□□ -0.66
TSC1-207ENST00000493467 RMND1Q9NWS8 449 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 CTNND2Q9UQB3 1225 aa10.94□□□□□ -0.66
TSC1-207ENST00000493467 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 CYP2D7A0A087X1C5 515 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 CCDC151A5D8V7 595 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 KIF5CO60282 957 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 VAMP1P23763 118 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 CASP1P29466 404 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 TXLNAP40222 546 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 BRD3Q15059 726 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 KRT31Q15323 416 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 TSNAXIP1Q2TAA8 658 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 DPH6Q7L8W6 267 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 NSUN4Q96CB9 384 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 ATP8A2Q9NTI2 1148 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 MYO1AQ9UBC5 1043 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 ARPP21Q9UBL0 812 aaPredicted RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 CDC23Q9UJX2 597 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 TAF1P21675 1872 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 SEC31AO94979 1220 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 CALML3P27482 149 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 CASP14P31944 242 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 CYP2C19P33261 490 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 LONP1P36776 959 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 COPB1P53618 953 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 PAK1Q13153 545 aa10.93□□□□□ -0.66
TSC1-207ENST00000493467 ZNF658Q5TYW1 1059 aaPredicted RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 TMEM121BQ9BXQ6 578 aaPredicted RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
TSC1-207ENST00000493467 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 hCG_1642624A0A1W2PR95 340 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 USP17L21D6R901 530 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 PIK3CDO00329 1044 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 FXR1P51114 621 aaKnown RBP eCLIP10.92□□□□□ -0.66
TSC1-207ENST00000493467 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
TSC1-207ENST00000493467 MSL3Q8N5Y2 521 aaKnown RBP10.92□□□□□ -0.66
TSC1-207ENST00000493467 MSANTD4Q8NCY6 345 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 ANKRD20A12PQ8NF67 263 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 PARD6BQ9BYG5 372 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 ARFGAP3Q9NP61 516 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 DCP1AQ9NPI6 582 aaPredicted RBP10.92□□□□□ -0.66
TSC1-207ENST00000493467 MINPP1Q9UNW1 487 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
TSC1-207ENST00000493467 SASH3O75995 380 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms