RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 RBM43Q6ZSC3 357 aaKnown RBP8.46□□□□□ -1.06
VPS45-209ENST00000491789 APOBEC3FQ8IUX4 373 aaKnown RBP8.46□□□□□ -1.06
VPS45-209ENST00000491789 SCUBE3Q8IX30 993 aa8.46□□□□□ -1.06
VPS45-209ENST00000491789 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
VPS45-209ENST00000491789 CHAMP1Q96JM3 812 aa8.46□□□□□ -1.06
VPS45-209ENST00000491789 DEFB129Q9H1M3 183 aa8.46□□□□□ -1.06
VPS45-209ENST00000491789 TNMDQ9H2S6 317 aa8.46□□□□□ -1.06
VPS45-209ENST00000491789 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
VPS45-209ENST00000491789 MORC2Q9Y6X9 1032 aaPredicted RBP8.46□□□□□ -1.06
VPS45-209ENST00000491789 TNKSO95271 1327 aa8.46□□□□□ -1.06
VPS45-209ENST00000491789 CLRN2A0PK11 232 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 USP2O75604 605 aaPredicted RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 BMP15O95972 392 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 PRDX5P30044 214 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 KIF5BP33176 963 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 ADD1P35611 737 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 USP5P45974 858 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 FAM160A1Q05DH4 1040 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 STK38Q15208 465 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 SF3A1Q15459 793 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 NTRK3Q16288 839 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 IFIT1BQ5T764 474 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 NBPF12Q5TAG4 269 aaPredicted RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 FANCBQ8NB91 859 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 SDR42E1Q8WUS8 393 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 MRPS27Q92552 414 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 PDLIM2Q96JY6 352 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 RBSNQ9H1K0 784 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 BRMS1Q9HCU9 246 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 GAKO14976 1311 aa8.45□□□□□ -1.06
VPS45-209ENST00000491789 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
VPS45-209ENST00000491789 MYH15Q9Y2K3 1946 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 GPR75-ASB3A0A0A6YYF3 556 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 USP17L21D6R901 530 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 GPR25O00155 361 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 RANBP6O60518 1105 aaKnown RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 PPP6R2O75170 966 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 S1PR4O95977 384 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 U2AF2P26368 475 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS45-209ENST00000491789 NF2P35240 595 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ME1P48163 572 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 GNAQP50148 359 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 DYNLL1P63167 89 aaKnown RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 RILPL1Q5EBL4 403 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 C12orf60Q5U649 245 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ANO1Q5XXA6 986 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 KRT40Q6A162 431 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ADALQ6DHV7 355 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ARMC9Q7Z3E5 817 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 CTU1Q7Z7A3 348 aaKnown RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 DGKHQ86XP1 1220 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ENAHQ8N8S7 591 aaPredicted RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 CTCFLQ8NI51 663 aaPredicted RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 ZNF384Q8TF68 577 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 ANKS1AQ92625 1134 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 CLMNQ96JQ2 1002 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 USP28Q96RU2 1077 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 SPSB2Q99619 263 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 PANK2Q9BZ23 570 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 FOXP1Q9H334 677 aaPredicted RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 TCP11L1Q9NUJ3 509 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 AATFQ9NY61 560 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS45-209ENST00000491789 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
VPS45-209ENST00000491789 TNRC18O15417 2968 aaPredicted RBP8.44□□□□□ -1.06
VPS45-209ENST00000491789 IRF6O14896 467 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SPTLC2O15270 562 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 PRPF3O43395 683 aaKnown RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 MMP1P03956 469 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 CDC27P30260 824 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 GJA5P36382 358 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SLC19A1P41440 591 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SOX10P56693 466 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 FUT2Q10981 343 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 FAM173BQ6P4H8 233 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 CCAR1Q8IX12 1150 aaKnown RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SLC10A4Q96EP9 437 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 CCDC34Q96HJ3 373 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 PGBD1Q96JS3 809 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 LZTS2Q9BRK4 669 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 SLC26A6Q9BXS9 759 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 TDRD3Q9H7E2 651 aaKnown RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 MCM9Q9NXL9 1143 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 DACT1Q9NYF0 836 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms