RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ACAD9Q9H845 621 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 FAM133AQ8N9E0 248 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 BADQ92934 168 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 RANBP2P49792 3224 aaKnown RBP13.57□□□□□ -0.24
SCFD1-206ENST00000484733 CLTBP09497 229 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 MCCP23508 829 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 ACLYP53396 1101 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 ANKRD33Q7Z3H0 272 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
SCFD1-206ENST00000484733 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 GJA9P57773 515 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 Q7L0L9 218 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-206ENST00000484733 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-206ENST00000484733 ELP1O95163 1332 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 ASB14A6NK59 587 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 KCNA10Q16322 511 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
SCFD1-206ENST00000484733 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-206ENST00000484733 AGBL1Q96MI9 1066 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 RNF146Q9NTX7 359 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 STX8Q9UNK0 236 aa13.56□□□□□ -0.24
SCFD1-206ENST00000484733 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
SCFD1-206ENST00000484733 FGAP02671 866 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 SHHQ15465 462 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 TRERF1Q96PN7 1200 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
SCFD1-206ENST00000484733 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 NMT2O60551 498 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
SCFD1-206ENST00000484733 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
SCFD1-206ENST00000484733 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
SCFD1-206ENST00000484733 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 HSPD1P10809 573 aaKnown RBP13.54□□□□□ -0.24
SCFD1-206ENST00000484733 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
SCFD1-206ENST00000484733 CDK7P50613 346 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 CNTN2Q02246 1040 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 RANBP17Q9H2T7 1088 aaKnown RBP13.54□□□□□ -0.24
SCFD1-206ENST00000484733 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
SCFD1-206ENST00000484733 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 MCM3APO60318 1980 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
SCFD1-206ENST00000484733 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 ADCY6O43306 1168 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 NT5C2P49902 561 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
SCFD1-206ENST00000484733 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-206ENST00000484733 C9orf50Q5SZB4 431 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
SCFD1-206ENST00000484733 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 ICAM1P05362 532 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 ALAS1P13196 640 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 ITGB8P26012 769 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
SCFD1-206ENST00000484733 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 TTC14Q96N46 770 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 TMEM39AQ9NV64 488 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 SZT2Q5T011 3432 aa13.53□□□□□ -0.24
SCFD1-206ENST00000484733 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 CTAGE5O15320 804 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.24
SCFD1-206ENST00000484733 ASGR1P07306 291 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.24
SCFD1-206ENST00000484733 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 Q9Y3F1 56 aa13.52□□□□□ -0.24
SCFD1-206ENST00000484733 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-206ENST00000484733 C6orf222P0C671 652 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-206ENST00000484733 RAG1P15918 1043 aa13.52□□□□□ -0.25
SCFD1-206ENST00000484733 MUM1L1Q5H9M0 696 aa13.52□□□□□ -0.25
SCFD1-206ENST00000484733 CCDC174Q6PII3 467 aa13.52□□□□□ -0.25
SCFD1-206ENST00000484733 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-206ENST00000484733 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms