RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 MOXD2PA6NHM9 499 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 RANBP6O60518 1105 aaKnown RBP23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 MCCP23508 829 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 TLE2Q04725 743 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 ACVR2BQ13705 512 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 MCMDC2Q4G0Z9 681 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 RCSD1Q6JBY9 416 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 Q7L0L9 218 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 NUP133Q8WUM0 1156 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 RNF146Q9NTX7 359 aa23.05■■□□□ 1.28
R3HDM1-215ENST00000483021 CLTBP09497 229 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 FGRP09769 529 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 ACLYP53396 1101 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 ARMCX2Q7L311 632 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 KLHDC9Q8NEP7 349 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 BADQ92934 168 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 FGD4Q96M96 766 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 SPC25Q9HBM1 224 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 STARD7Q9NQZ5 370 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 LRRC37A2A6NM11 1700 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 ZNF536O15090 1300 aa23.04■■□□□ 1.28
R3HDM1-215ENST00000483021 A0A0D9SFI3 127 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 POTEB2H3BUK9 544 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 NMT2O60551 498 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 CST5P28325 142 aaPredicted RBP23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 NOVP48745 357 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 KCTD1Q719H9 257 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 FAM227BQ96M60 508 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 A1CFQ9NQ94 594 aaKnown RBP23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 INCENPQ9NQS7 918 aa23.03■■□□□ 1.28
R3HDM1-215ENST00000483021 TRIM43BA6NCK2 446 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 PQBP1O60828 265 aaKnown RBP23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 FAM109BQ6ICB4 259 aaPredicted RBP23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 SH3RF1Q7Z6J0 888 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 CCDC144CPQ8IYA2 1237 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 PCSK9Q8NBP7 692 aaKnown RBP23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 DCAF4Q8WV16 495 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 TRIM43Q96BQ3 446 aaPredicted RBP23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 AGBL1Q96MI9 1066 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 LNPKQ9C0E8 428 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 MTMR10Q9NXD2 777 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 PRR12Q9ULL5 1215 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 STXBP5LQ9Y2K9 1186 aa23.02■■□□□ 1.28
R3HDM1-215ENST00000483021 TRIM6-TRIM34B2RNG4 842 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 FGAP02671 866 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 CCDC96Q2M329 555 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 CCDC144BQ3MJ40 725 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 ANKRD33Q7Z3H0 272 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 GLT1D1Q96MS3 346 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 TOX2Q96NM4 488 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 TRERF1Q96PN7 1200 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 RWDD1Q9H446 243 aaPredicted RBP23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 CCDC171Q6TFL3 1326 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 LAMA4Q16363 1823 aa23.01■■□□□ 1.27
R3HDM1-215ENST00000483021 ASB14A6NK59 587 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 KIAA0355O15063 1070 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 C6orf222P0C671 652 aaPredicted RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 HSPD1P10809 573 aaKnown RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 ALAS1P13196 640 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 GJA9P57773 515 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 CNTN2Q02246 1040 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 KCNA10Q16322 511 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 CCSAPQ6IQ19 270 aaPredicted RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 SMC5Q8IY18 1101 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 UPF3AQ9H1J1 476 aaKnown RBP23■■□□□ 1.27
R3HDM1-215ENST00000483021 ELP1O95163 1332 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 MROH7Q68CQ1 1323 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 LCTP09848 1927 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 A0A0C4DFX4 3053 aa23■■□□□ 1.27
R3HDM1-215ENST00000483021 DCDC2CA8MYV0 355 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 TOP1P11387 765 aaKnown RBP22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 RAG1P15918 1043 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 NMIQ13287 307 aaPredicted RBP22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 SHHQ15465 462 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 RRP12Q5JTH9 1297 aaKnown RBP22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 CCDC174Q6PII3 467 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 CHMP4CQ96CF2 233 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 KATNBL1Q9H079 304 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 TCP11L1Q9NUJ3 509 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 TMEM39AQ9NV64 488 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 MTMR7Q9Y216 660 aa22.99■■□□□ 1.27
R3HDM1-215ENST00000483021 MYADML2A6NDP7 307 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 ADCY6O43306 1168 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 ICAM1P05362 532 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 C9orf50Q5SZB4 431 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 RASGRP2Q7LDG7 609 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 ZNF589Q86UQ0 364 aaPredicted RBP22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 RILPL2Q969X0 211 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 CCPG1Q9ULG6 757 aa22.98■■□□□ 1.27
R3HDM1-215ENST00000483021 ZNF697Q5TEC3 545 aa22.97■■□□□ 1.27
R3HDM1-215ENST00000483021 BTNL9Q6UXG8 535 aa22.97■■□□□ 1.27
R3HDM1-215ENST00000483021 RANBP17Q9H2T7 1088 aaKnown RBP22.97■■□□□ 1.27
R3HDM1-215ENST00000483021 SOWAHBA6NEL2 793 aa22.96■■□□□ 1.27
R3HDM1-215ENST00000483021 ASGR1P07306 291 aa22.96■■□□□ 1.27
R3HDM1-215ENST00000483021 NKX3-2P78367 333 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms