RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 GNGT1P63211 74 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 RNASELQ05823 741 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 DYNC1I2Q13409 638 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SDR42E1Q8WUS8 393 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 PIH1D3Q9NQM4 214 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 TMOD2Q9NZR1 351 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 PRKAB2O43741 272 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 GAS8O95995 478 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SKIP12755 728 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 NR5A1Q13285 461 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SND1Q7KZF4 910 aaKnown RBP eCLIP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 MB21D2Q8IYB1 491 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 ZNF444Q8N0Y2 327 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 FANCBQ8NB91 859 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 TTLL11Q8NHH1 800 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 PLIN2Q99541 437 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.73□□□□□ -1.331e-13■□□□□ 10.1
HNRNPU-208ENST00000475997 CAPS2Q9BXY5 557 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 VAT1LQ9HCJ6 419 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 NPHP4O75161 1426 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 ICE2Q659A1 982 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 GRAMD1CQ8IYS0 662 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 IQUBQ8NA54 791 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 PRPF31Q8WWY3 499 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 P3H4Q92791 437 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 ATP2A3Q93084 1043 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 HAUS1Q96CS2 278 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SAAL1Q96ER3 474 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 MAP3K15Q6ZN16 1313 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 KIF28PB7ZC32 967 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 IKBKBO14920 756 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 CHMP2AO43633 222 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SH3BP5O60239 455 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 FLOT1O75955 427 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 PDE4BQ07343 736 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 HLFQ16534 295 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 CCDC93Q567U6 631 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 CYB5R4Q7L1T6 521 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 NLRP10Q86W26 655 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 NLRP7Q8WX94 980 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 IQCDQ96DY2 449 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 NOX5Q96PH1 765 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 TRIM6Q9C030 488 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 KAT14Q9H8E8 782 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 STK38LQ9Y2H1 464 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 ZBTB1Q9Y2K1 713 aa6.73□□□□□ -1.33
HNRNPU-208ENST00000475997 SH2B2O14492 632 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 PPP6R2O75170 966 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 STX2P32856 288 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ASIC1P78348 528 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CFAP221Q4G0U5 840 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 TBC1D10CQ8IV04 446 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ZSCAN29Q8IWY8 852 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 UBL4BQ8N7F7 174 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 NUP58Q9BVL2 599 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 YY1AP1Q9H869 796 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 PPP2R2CQ9Y2T4 447 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 WDR17Q8IZU2 1322 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CRCPO75575 148 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ZFXP17010 805 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 GEN1Q17RS7 908 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 FBXO38Q6PIJ6 1188 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ENGASEQ8NFI3 743 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CCHCR1Q8TD31 782 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CRNKL1Q9BZJ0 848 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 RAB17Q9H0T7 212 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 RFX7Q2KHR2 1363 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 PXDNQ92626 1479 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 EFCAB8A8MWE9 144 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CDC27P30260 824 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 VPS41P49754 854 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 GNAQP50148 359 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ARHGAP4P98171 946 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 MAIP1Q8WWC4 291 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ABTB1Q969K4 478 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 TSC22D3Q99576 134 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ACTR5Q9H9F9 607 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ANKIB1Q9P2G1 1089 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 C3P01024 1663 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 MROH5Q6ZUA9 1318 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 RGS16O15492 202 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CLTAP09496 248 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 PCYT1AP49585 367 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 ITIH3Q06033 890 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 RBM43Q6ZSC3 357 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 PIK3AP1Q6ZUJ8 805 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 CFAP61Q8NHU2 1237 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 STRBPQ96SI9 672 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 FAM204AQ9H8W3 233 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 SEC31BQ9NQW1 1179 aa6.72□□□□□ -1.33
HNRNPU-208ENST00000475997 RTL9Q8NET4 1388 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms