RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TECP42680 631 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 HPS3Q969F9 1004 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 CARD6Q9BX69 1037 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 PSD3Q9NYI0 1048 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 CUTAO60888 179 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 EVCP57679 992 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 INHBEP58166 350 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 MYL5Q02045 173 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 IQCB1Q15051 598 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 UBE2SQ16763 222 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 LRRC8AQ8IWT6 810 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 CDK8P49336 464 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
USP11-206ENST00000469080 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 CEP95Q96GE4 821 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 HINFPQ9BQA5 517 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
USP11-206ENST00000469080 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 USP17L5A8MUK1 530 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 TCP10L2B9ZVM9 353 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
USP11-206ENST00000469080 SKAP2O75563 359 aaPredicted RBP13.79□□□□□ -0.2
USP11-206ENST00000469080 UBXN2AP68543 259 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
USP11-206ENST00000469080 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
USP11-206ENST00000469080 TDRD7Q8NHU6 1098 aaKnown RBP13.79□□□□□ -0.2
USP11-206ENST00000469080 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 N4BP3O15049 544 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 SGMS1Q86VZ5 419 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 PPFIBP1Q86W92 1011 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 KIRREL3Q8IZU9 778 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 TAB2Q9NYJ8 693 aa13.79□□□□□ -0.2
USP11-206ENST00000469080 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 TTBK2Q6IQ55 1244 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 ARMCX6Q7L4S7 300 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 SPATS2LQ9NUQ6 558 aaKnown RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 CCNHP51946 323 aaPredicted RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 NAP1L1P55209 391 aaKnown RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 ATP8A2Q9NTI2 1148 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 RFX7Q2KHR2 1363 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 C21orf2O43822 256 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 CLNS1AP54105 237 aaKnown RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 GSTO1P78417 241 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 DDR1Q08345 913 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 PRKG1Q13976 671 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 GDAQ9Y2T3 454 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 RPS6KL1Q9Y6S9 549 aa13.78□□□□□ -0.2
USP11-206ENST00000469080 COL16A1Q07092 1604 aaPredicted RBP13.78□□□□□ -0.2
USP11-206ENST00000469080 ASIC1P78348 528 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 TROAPQ12815 778 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 NFIAQ12857 509 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 DTHD1Q6ZMT9 781 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 MIGA2Q7L4E1 593 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 C2CD5Q86YS7 1000 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 BLIDQ8IZY5 108 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.2
USP11-206ENST00000469080 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.2
USP11-206ENST00000469080 CPP00450 1065 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.213e-12■■■■■ 43.2
USP11-206ENST00000469080 LRRC31Q6UY01 552 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 RABEP2Q9H5N1 569 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
USP11-206ENST00000469080 MYO5AQ9Y4I1 1855 aaKnown RBP13.77□□□□□ -0.21
USP11-206ENST00000469080 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 ALX1Q15699 326 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
USP11-206ENST00000469080 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
USP11-206ENST00000469080 AKR1B1P15121 316 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 CUL4BQ13620 913 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 RNF26Q9BY78 433 aaPredicted RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms