RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 SLFN13Q68D06 897 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 ARMCX2Q7L311 632 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 NEDD1Q8NHV4 660 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 GLT1D1Q96MS3 346 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 ABHD16BQ9H3Z7 469 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 HOMER2Q9NSB8 354 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 TBX21Q9UL17 535 aa22.42■■□□□ 1.18
SRSF4-202ENST00000466448 ELP1O95163 1332 aa22.41■■□□□ 1.18
SRSF4-202ENST00000466448 ASGR1P07306 291 aa22.41■■□□□ 1.18
SRSF4-202ENST00000466448 BMP3P12645 472 aa22.41■■□□□ 1.18
SRSF4-202ENST00000466448 NACAP1Q9BZK3 213 aa22.41■■□□□ 1.18
SRSF4-202ENST00000466448 UPF3AQ9H1J1 476 aaKnown RBP22.41■■□□□ 1.18
SRSF4-202ENST00000466448 SPTBN5Q9NRC6 3674 aaKnown RBP22.41■■□□□ 1.18
SRSF4-202ENST00000466448 TMEM265A0A087WTH1 108 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 TMEM232C9JQI7 657 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 TIMP1P01033 207 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 FOSL2P15408 326 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 CDK7P50613 346 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 GJA9P57773 515 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 PDE4BQ07343 736 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 LRRFIP1Q32MZ4 808 aaKnown RBP22.4■■□□□ 1.18
SRSF4-202ENST00000466448 CCDC144CPQ8IYA2 1237 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 PCSK9Q8NBP7 692 aaKnown RBP22.4■■□□□ 1.18
SRSF4-202ENST00000466448 KATNBL1Q9H079 304 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 SPC25Q9HBM1 224 aa22.4■■□□□ 1.18
SRSF4-202ENST00000466448 MROH7Q68CQ1 1323 aa22.39■■□□□ 1.18
SRSF4-202ENST00000466448 TTC41PQ6P2S7 1318 aa22.39■■□□□ 1.18
SRSF4-202ENST00000466448 STAT2P52630 851 aa22.39■■□□□ 1.17
SRSF4-202ENST00000466448 TFAP4Q01664 338 aa22.39■■□□□ 1.17
SRSF4-202ENST00000466448 CNTN2Q02246 1040 aa22.39■■□□□ 1.17
SRSF4-202ENST00000466448 PPARAQ07869 468 aa22.39■■□□□ 1.17
SRSF4-202ENST00000466448 PI4K2BQ8TCG2 481 aa22.39■■□□□ 1.17
SRSF4-202ENST00000466448 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
SRSF4-202ENST00000466448 ZNF536O15090 1300 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.38■■□□□ 1.17
SRSF4-202ENST00000466448 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.38■■□□□ 1.17
SRSF4-202ENST00000466448 CTAGE5O15320 804 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 FDX1P10109 184 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 GNASQ5JWF2 1037 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 MFSD5Q6N075 450 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 FAM133AQ8N9E0 248 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 OTUD7AQ8TE49 926 aaPredicted RBP22.38■■□□□ 1.17
SRSF4-202ENST00000466448 VTI1AQ96AJ9 217 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 CHMP4CQ96CF2 233 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 GMCL1Q96IK5 515 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 AGBL1Q96MI9 1066 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.38■■□□□ 1.177e-7■■□□□ 11.5
SRSF4-202ENST00000466448 NAPBQ9H115 298 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 ACAD9Q9H845 621 aa22.38■■□□□ 1.17
SRSF4-202ENST00000466448 A0A0U1RQG5 324 aaPredicted RBP22.37■■□□□ 1.17
SRSF4-202ENST00000466448 SLC3A2P08195 630 aaKnown RBP22.37■■□□□ 1.17
SRSF4-202ENST00000466448 DNAJB2P25686 324 aa22.37■■□□□ 1.17
SRSF4-202ENST00000466448 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
SRSF4-202ENST00000466448 C16orf59Q7L2K0 433 aa22.37■■□□□ 1.17
SRSF4-202ENST00000466448 FSD1Q9BTV5 496 aa22.37■■□□□ 1.17
SRSF4-202ENST00000466448 A1CFQ9NQ94 594 aaKnown RBP22.37■■□□□ 1.17
SRSF4-202ENST00000466448 RNF146Q9NTX7 359 aa22.37■■□□□ 1.17
SRSF4-202ENST00000466448 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.36■■□□□ 1.17
SRSF4-202ENST00000466448 SOWAHBA6NEL2 793 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 ARVCFO00192 962 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 ERC2O15083 957 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 SLC1A4P43007 532 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 IKQ13123 557 aaPredicted RBP22.36■■□□□ 1.17
SRSF4-202ENST00000466448 GRIN2CQ14957 1233 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 FAM160B2Q86V87 743 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 FAM126BQ8IXS8 530 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 STAG1Q8WVM7 1258 aa22.36■■□□□ 1.17
SRSF4-202ENST00000466448 MYH4Q9Y623 1939 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 FOXP2O15409 715 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 CSF2RAP15509 400 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 MCCP23508 829 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 NKX3-2P78367 333 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 BEX3Q00994 111 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 CHURC1Q8WUH1 139 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.35■■□□□ 1.177e-16■■□□□ 12.1
SRSF4-202ENST00000466448 PRUNE2Q8WUY3 3088 aa22.35■■□□□ 1.17
SRSF4-202ENST00000466448 ASTN1O14525 1302 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 TNFAIP2Q03169 654 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 PPIGQ13427 754 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■□□□ 13.3
SRSF4-202ENST00000466448 KCTD1Q719H9 257 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 RASGRP2Q7LDG7 609 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 INCENPQ9NQS7 918 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 IL17RBQ9NRM6 502 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 STX8Q9UNK0 236 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 PCDHB15Q9Y5E8 787 aa22.34■■□□□ 1.17
SRSF4-202ENST00000466448 DDX49Q9Y6V7 483 aaKnown RBP22.34■■□□□ 1.17
SRSF4-202ENST00000466448 NMT2O60551 498 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 SNAP25P60880 206 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 TKFCQ3LXA3 575 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 TMEM240Q5SV17 173 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 RASIP1Q5U651 963 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 CCDC129Q6ZRS4 1044 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 NOL8Q76FK4 1167 aaKnown RBP22.33■■□□□ 1.17
SRSF4-202ENST00000466448 TMEM199Q8N511 208 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 TIFAQ96CG3 184 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 PPP1R12CQ9BZL4 782 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 ZNF576Q9H609 170 aa22.33■■□□□ 1.17
SRSF4-202ENST00000466448 GNEQ9Y223 722 aaKnown RBP22.33■■□□□ 1.17
SRSF4-202ENST00000466448 ASB14A6NK59 587 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms