RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 ISY1Q9ULR0 285 aaKnown RBP15.19■□□□□ 0.02
SRM-203ENST00000465788 ASB14A6NK59 587 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 ACLYP53396 1101 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
SRM-203ENST00000465788 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
SRM-203ENST00000465788 CCDC174Q6PII3 467 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 GLT1D1Q96MS3 346 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 SEC62Q99442 399 aaKnown RBP15.18■□□□□ 0.02
SRM-203ENST00000465788 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 STX8Q9UNK0 236 aa15.18■□□□□ 0.02
SRM-203ENST00000465788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRM-203ENST00000465788 TMEM265A0A087WTH1 108 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 PQBP1O60828 265 aaKnown RBP15.17■□□□□ 0.02
SRM-203ENST00000465788 SHHQ15465 462 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 ALX1Q15699 326 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
SRM-203ENST00000465788 SEZ6LQ9BYH1 1024 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 UPF3AQ9H1J1 476 aaKnown RBP15.17■□□□□ 0.02
SRM-203ENST00000465788 TMEM39AQ9NV64 488 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 CUL9Q8IWT3 2517 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
SRM-203ENST00000465788 DLL1O00548 723 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 ORC4O43929 436 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 C6orf222P0C671 652 aaPredicted RBP15.16■□□□□ 0.02
SRM-203ENST00000465788 GJA9P57773 515 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 FPGSQ05932 587 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
SRM-203ENST00000465788 KCNA10Q16322 511 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 SH3RF1Q7Z6J0 888 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 COL6A3P12111 3177 aa15.16■□□□□ 0.02
SRM-203ENST00000465788 LOC102724159A0A0B4J2E5 919 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 TLR3O15455 904 aaKnown RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 RANBP6O60518 1105 aaKnown RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 MCCP23508 829 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 NT5C2P49902 561 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 NKX3-2P78367 333 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 PWP2Q15269 919 aaKnown RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 CCSAPQ6IQ19 270 aaPredicted RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 CCDC129Q6ZRS4 1044 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
SRM-203ENST00000465788 DCAF4Q8WV16 495 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 HOMER2Q9NSB8 354 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 ZMYM6O95789 1325 aa15.15■□□□□ 0.02
SRM-203ENST00000465788 ZEB2O60315 1214 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 CABYRO75952 493 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 ASGR1P07306 291 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 FGRP09769 529 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 NOVP48745 357 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 PDE1AP54750 535 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 MFAP1P55081 439 aaKnown RBP15.14■□□□□ 0.01
SRM-203ENST00000465788 GNASQ5JWF2 1037 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 CCDC144CPQ8IYA2 1237 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 LENG1Q96BZ8 264 aaPredicted RBP15.14■□□□□ 0.01
SRM-203ENST00000465788 RNPC3Q96LT9 517 aaKnown RBP15.14■□□□□ 0.01
SRM-203ENST00000465788 FGD4Q96M96 766 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
SRM-203ENST00000465788 A1CFQ9NQ94 594 aaKnown RBP15.14■□□□□ 0.01
SRM-203ENST00000465788 TIMP1P01033 207 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 ALAS1P13196 640 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 TNFAIP2Q03169 654 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 CTDSPL2Q05D32 466 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 FAAP100Q0VG06 881 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 PPIGQ13427 754 aaKnown RBP eCLIP15.13■□□□□ 0.015e-16■□□□□ 9.6
SRM-203ENST00000465788 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 GUCD1Q96NT3 240 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
SRM-203ENST00000465788 PRR12Q9ULL5 1215 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 Q9Y3F1 56 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 ZNF536O15090 1300 aa15.13■□□□□ 0.01
SRM-203ENST00000465788 ARVCFO00192 962 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 FOXP2O15409 715 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 ICAM1P05362 532 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
SRM-203ENST00000465788 CDK7P50613 346 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 KCTD1Q719H9 257 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
SRM-203ENST00000465788 AGBL1Q96MI9 1066 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 KATNBL1Q9H079 304 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 AP5M1Q9H0R1 490 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 IL17RBQ9NRM6 502 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
SRM-203ENST00000465788 TBX21Q9UL17 535 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms