RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
GYPC-205ENST00000464053 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
GYPC-205ENST00000464053 SMCHD1A6NHR9 2005 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 PLA2G6O60733 806 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 TAL1P17542 331 aaPredicted RBP17.71■□□□□ 0.43
GYPC-205ENST00000464053 NASPP49321 788 aaPredicted RBP17.71■□□□□ 0.43
GYPC-205ENST00000464053 HMGCS2P54868 508 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 TTLL12Q14166 644 aaPredicted RBP17.71■□□□□ 0.43
GYPC-205ENST00000464053 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
GYPC-205ENST00000464053 GALNT17Q6IS24 598 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
GYPC-205ENST00000464053 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 LINC00301Q8NCQ3 95 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 CHURC1Q8WUH1 139 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 PGBD1Q96JS3 809 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 FEM1BQ9UK73 627 aa17.71■□□□□ 0.43
GYPC-205ENST00000464053 WNT7AO00755 349 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 ATP2B1P20020 1258 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 USP14P54578 494 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 SKOR2Q2VWA4 1001 aaPredicted RBP17.7■□□□□ 0.42
GYPC-205ENST00000464053 ELP3Q9H9T3 547 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 CSADQ9Y600 493 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 UBE2HP62256 183 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 RILPL1Q5EBL4 403 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
GYPC-205ENST00000464053 PCDHB6Q9Y5E3 794 aa17.7■□□□□ 0.42
GYPC-205ENST00000464053 PTPRFP10586 1907 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 GNA11P29992 359 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 STK38Q15208 465 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 PTPAQ15257 358 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 KLHL40Q2TBA0 621 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 USH1GQ495M9 461 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 FBXO11Q86XK2 927 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 ANKRD13AQ8IZ07 590 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 AMNQ9BXJ7 453 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 TANGO6Q9C0B7 1094 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
GYPC-205ENST00000464053 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
GYPC-205ENST00000464053 YEATS4O95619 227 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 ADCY7P51828 1080 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 CCDC174Q6PII3 467 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
GYPC-205ENST00000464053 C19orf81C9J6K1 198 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 SPTLC2O15270 562 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 SLF1Q9BQI6 1058 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
GYPC-205ENST00000464053 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
GYPC-205ENST00000464053 ME1P48163 572 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 UBE2SQ16763 222 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 JAKMIP3Q5VZ66 844 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 GZF1Q9H116 711 aaPredicted RBP17.67■□□□□ 0.42
GYPC-205ENST00000464053 PCDHA7Q9UN72 937 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 RLFQ13129 1914 aa17.67■□□□□ 0.42
GYPC-205ENST00000464053 CCDC194A0A1B0GVG4 234 aa17.66■□□□□ 0.42
GYPC-205ENST00000464053 FLOT1O75955 427 aa17.66■□□□□ 0.42
GYPC-205ENST00000464053 MBD3O95983 291 aa17.66■□□□□ 0.42
GYPC-205ENST00000464053 REXO1Q8N1G1 1221 aaKnown RBP17.66■□□□□ 0.42
GYPC-205ENST00000464053 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
GYPC-205ENST00000464053 OTUD5Q96G74 571 aa17.66■□□□□ 0.42
GYPC-205ENST00000464053 PSTPIP2Q9H939 334 aa17.66■□□□□ 0.42
GYPC-205ENST00000464053 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
GYPC-205ENST00000464053 IRF6O14896 467 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 PPATQ06203 517 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 ZNF174Q15697 407 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 INF2Q27J81 1249 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 SH3D19Q5HYK7 790 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 TTC38Q5R3I4 469 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 LDLRAD1Q5T700 205 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 KCNG4Q8TDN1 519 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 CUL5Q93034 780 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.65■□□□□ 0.42
GYPC-205ENST00000464053 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 MRVI1Q9Y6F6 885 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 SPDYE5A6NIY4 337 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 OPLAHO14841 1288 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 CLK2P49760 499 aaKnown RBP17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
GYPC-205ENST00000464053 CAVIN1Q6NZI2 390 aaKnown RBP17.65■□□□□ 0.42
GYPC-205ENST00000464053 USP17L6PQ6QN14 398 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms