RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 KRT40Q6A162 431 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 USP48Q86UV5 1035 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 SIAH1Q8IUQ4 282 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 GMCL1P1Q8NEA9 526 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 AIFM3Q96NN9 605 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 SPZ1Q9BXG8 430 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 ISY1Q9ULR0 285 aaKnown RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 BAZ2BQ9UIF8 2168 aaKnown RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 PHF20L1A8MW92 1017 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 F5H6K3 240 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 SCG2P13521 617 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 SLC1A4P43007 532 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 KLRC3Q07444 240 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 PFKFB3Q16875 520 aaPredicted RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 OTUD7BQ6GQQ9 843 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 BRAPQ7Z569 592 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 PNMA8AQ86V59 439 aaPredicted RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 RRP36Q96EU6 259 aaKnown RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 GMCL1Q96IK5 515 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 SEC63Q9UGP8 760 aaKnown RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 FRMPD2Q68DX3 1309 aaPredicted RBP9.44□□□□□ -0.9
RPA3-205ENST00000462723 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 DOCK1Q14185 1865 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 TCHHQ07283 1943 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 MYH15Q9Y2K3 1946 aa9.44□□□□□ -0.9
RPA3-205ENST00000462723 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 hCG_1642624A0A1W2PR95 340 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 NDUFB10O96000 172 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 MMP1P03956 469 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 KRT85P78386 507 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 PKN1Q16512 942 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 RASGRP2Q7LDG7 609 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 PIBF1Q8WXW3 757 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 ZNF396Q96N95 335 aaPredicted RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 WRNIP1Q96S55 665 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 FEZ1Q99689 392 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 TAF1DQ9H5J8 278 aaPredicted RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 BRMS1Q9HCU9 246 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 SH3GLB2Q9NR46 395 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
RPA3-205ENST00000462723 PICK1Q9NRD5 415 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 GJB4Q9NTQ9 266 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 TMX2Q9Y320 296 aa9.43□□□□□ -0.9
RPA3-205ENST00000462723 UTRNP46939 3433 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 ADM5C9JUS6 153 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CYTH3O43739 400 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 BMP3P12645 472 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CALML3P27482 149 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 NF2P35240 595 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 ECE1P42892 770 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 KCTD1Q719H9 257 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 HEATR3Q7Z4Q2 680 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
RPA3-205ENST00000462723 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CCDC148Q8NFR7 591 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 ACER1Q8TDN7 264 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CCDC12Q8WUD4 166 aaPredicted RBP9.42□□□□□ -0.9
RPA3-205ENST00000462723 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
RPA3-205ENST00000462723 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 FOXP1Q9H334 677 aaPredicted RBP9.42□□□□□ -0.9
RPA3-205ENST00000462723 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 VCPKMTQ9H867 229 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 VAT1LQ9HCJ6 419 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 VPS54Q9P1Q0 977 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 CNPY2Q9Y2B0 182 aa9.42□□□□□ -0.9
RPA3-205ENST00000462723 hCG_1984214I3L0E3 225 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 FIBPO43427 364 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
RPA3-205ENST00000462723 PRPF40AO75400 957 aaKnown RBP9.41□□□□□ -0.9
RPA3-205ENST00000462723 U2AF2P26368 475 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPA3-205ENST00000462723 INPP5BP32019 993 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 KRT2P35908 639 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 NLRP5P59047 1200 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 IKQ13123 557 aaPredicted RBP9.41□□□□□ -0.9
RPA3-205ENST00000462723 SLC35G1Q2M3R5 365 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 SKOR2Q2VWA4 1001 aaPredicted RBP9.41□□□□□ -0.9
RPA3-205ENST00000462723 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 HOMER1Q86YM7 354 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms