RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ALAS1P13196 640 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 CPA1P15085 419 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 SLC16A2P36021 539 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 KCTD2Q14681 263 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 CDC37Q16543 378 aaPredicted RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 CCDC174Q6PII3 467 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 PLEKHH3Q7Z736 793 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 HOMER1Q86YM7 354 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 RIOX2Q8IUF8 465 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 CHST13Q8NET6 341 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 RAET1EQ8TD07 263 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 MPHOSPH6Q99547 160 aaKnown RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 MYL10Q9BUA6 226 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 SPZ1Q9BXG8 430 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 MOV10L1Q9BXT6 1211 aaKnown RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 AGXT2Q9BYV1 514 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 UBA5Q9GZZ9 404 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 SLKQ9H2G2 1235 aaPredicted RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 R3HDMLQ9H3Y0 253 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 ACAD9Q9H845 621 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.22
SF3B1-206ENST00000462613 VAT1LQ9HCJ6 419 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 BTBD7Q9P203 1132 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 RBPJLQ9UBG7 517 aa7.4□□□□□ -1.22
SF3B1-206ENST00000462613 PFASO15067 1338 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ABCB11O95342 1321 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 SLC15A5A6NIM6 579 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 B4DLN1 442 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ZBTB5O15062 677 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ERCC3P19447 782 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 RXRAP19793 462 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 RGS2P41220 211 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MCM2P49736 904 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MRPL12P52815 198 aaKnown RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 TMEM132BQ14DG7 1078 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 TTBK2Q6IQ55 1244 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 GPR142Q7Z601 462 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 DPP9Q86TI2 863 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MCF2L2Q86YR7 1114 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 CCDC144CPQ8IYA2 1237 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 TRMT44Q8IYL2 757 aaKnown RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ADGRF4Q8IZF3 695 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ABRAQ8N0Z2 381 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ANKRD35Q8N283 1001 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 NKX2-3Q8TAU0 364 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 IL17RAQ96F46 866 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 DDX11Q96FC9 970 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ZNF274Q96GC6 653 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 TBC1D32Q96NH3 1257 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MMP19Q99542 508 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 AMNQ9BXJ7 453 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ALDH8A1Q9H2A2 487 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 RANBP17Q9H2T7 1088 aaKnown RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 SENP2Q9HC62 589 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 TXNRD2Q9NNW7 524 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 GPHNQ9NQX3 736 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 HOMER2Q9NSB8 354 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 RNF146Q9NTX7 359 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MAD2L2Q9UI95 211 aa7.39□□□□□ -1.23
SF3B1-206ENST00000462613 ZNF214Q9UL59 606 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 MRPL11Q9Y3B7 192 aaKnown RBP7.39□□□□□ -1.23
SF3B1-206ENST00000462613 PNMA6FA0A0J9YX94 578 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 hCG_1984214I3L0E3 225 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 CNMDO75829 334 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 XBP1P17861 261 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 PTPREP23469 700 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 TOB2Q14106 344 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 QRICH1Q2TAL8 776 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 Q3C1V9 767 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 USH1GQ495M9 461 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 FBXO46Q6PJ61 603 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 TMTC3Q6ZXV5 915 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 OTOP1Q7RTM1 612 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 RAB11FIP4Q86YS3 637 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 SAMD3Q8N6K7 520 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 ZNF713Q8N859 430 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 CCDC12Q8WUD4 166 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 CUL5Q93034 780 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 TRERF1Q96PN7 1200 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 MAF1Q9H063 256 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 PORCNQ9H237 461 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 RIOX1Q9H6W3 641 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 SH2B1Q9NRF2 756 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 BIN2Q9UBW5 565 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-206ENST00000462613 SRRDQ9UH36 339 aa7.38□□□□□ -1.23
SF3B1-206ENST00000462613 NID2Q14112 1375 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 KIAA1217Q5T5P2 1943 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PTPDC1A2A3K4 754 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 CYP2B6P20813 491 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms