RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
ATG4B-213ENST00000460211 TNKSO95271 1327 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 RLFQ13129 1914 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 PDHBP11177 359 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 PRKAR2AP13861 404 aaKnown RBP17.51■□□□□ 0.39
ATG4B-213ENST00000460211 BMP8BP34820 402 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-213ENST00000460211 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
ATG4B-213ENST00000460211 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
ATG4B-213ENST00000460211 DEFB123Q8N688 67 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
ATG4B-213ENST00000460211 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
ATG4B-213ENST00000460211 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-213ENST00000460211 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 E7EWF7 191 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 CCL14Q16627 93 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 SYDE2Q5VT97 1194 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 BTNL9Q6UXG8 535 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 ENAHQ8N8S7 591 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-213ENST00000460211 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
ATG4B-213ENST00000460211 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
ATG4B-213ENST00000460211 OLFML2BQ68BL8 750 aa17.49■□□□□ 0.39
ATG4B-213ENST00000460211 NPLOC4Q8TAT6 608 aa17.49■□□□□ 0.39
ATG4B-213ENST00000460211 OGDHLQ9ULD0 1010 aa17.49■□□□□ 0.39
ATG4B-213ENST00000460211 DIS3Q9Y2L1 958 aaKnown RBP17.49■□□□□ 0.39
ATG4B-213ENST00000460211 A0A0G2JMZ2 1700 aa17.49■□□□□ 0.39
ATG4B-213ENST00000460211 PFASO15067 1338 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 COBLO75128 1261 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 SLC16A2P36021 539 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 CACNB2Q08289 660 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-213ENST00000460211 MAP3K21Q5TCX8 1036 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 CCDC174Q6PII3 467 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 UBE2OQ9C0C9 1292 aaKnown RBP17.48■□□□□ 0.39
ATG4B-213ENST00000460211 RIPK3Q9Y572 518 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 LAMA4Q16363 1823 aa17.48■□□□□ 0.39
ATG4B-213ENST00000460211 PARP1P09874 1014 aaKnown RBP17.47■□□□□ 0.39
ATG4B-213ENST00000460211 ASPRV1Q53RT3 343 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 RASGRP2Q7LDG7 609 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 TDHQ8IZJ6 230 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 ACAD9Q9H845 621 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 FLRT1Q9NZU1 646 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
ATG4B-213ENST00000460211 SLC27A2O14975 620 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 ICAM1P05362 532 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 PGK2P07205 417 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 ALAS1P13196 640 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-213ENST00000460211 CYP2C19P33261 490 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 WTAPQ15007 396 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 NECTIN1Q15223 517 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 SEC23AQ15436 765 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.46■□□□□ 0.39
ATG4B-213ENST00000460211 MAML3Q96JK9 1138 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 TRERF1Q96PN7 1200 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
ATG4B-213ENST00000460211 RNF146Q9NTX7 359 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 PARP14Q460N5 1801 aa17.46■□□□□ 0.39
ATG4B-213ENST00000460211 MSCO60682 206 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 GOLGA8HP0CJ92 632 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 CNGA1P29973 690 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 MCM5P33992 734 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 SNAP25P60880 206 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 LRIT3Q3SXY7 679 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 TMEM67Q5HYA8 995 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 STOX1Q6ZVD7 989 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 ZNF536O15090 1300 aa17.45■□□□□ 0.38
ATG4B-213ENST00000460211 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-213ENST00000460211 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 GPR153Q6NV75 609 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 MB21D2Q8IYB1 491 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-213ENST00000460211 TMTC2Q8N394 836 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
ATG4B-213ENST00000460211 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
ATG4B-213ENST00000460211 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-213ENST00000460211 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
ATG4B-213ENST00000460211 REC8O95072 547 aa17.43■□□□□ 0.38
ATG4B-213ENST00000460211 KRT32Q14532 448 aa17.43■□□□□ 0.38
ATG4B-213ENST00000460211 CHST3Q7LGC8 479 aa17.43■□□□□ 0.38
ATG4B-213ENST00000460211 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
ATG4B-213ENST00000460211 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
ATG4B-213ENST00000460211 MTMR10Q9NXD2 777 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms