RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PCNTO95613 3336 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 RPN1P04843 607 aaKnown RBP16.73■□□□□ 0.27
SF1-211ENST00000448404 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
SF1-211ENST00000448404 UBA7P41226 1012 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 FXR1P51114 621 aaKnown RBP eCLIP16.73■□□□□ 0.27
SF1-211ENST00000448404 TBX2Q13207 712 aaPredicted RBP16.73■□□□□ 0.27
SF1-211ENST00000448404 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 IGSF22Q8N9C0 903 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 ANKS1AQ92625 1134 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 DISC1Q9NRI5 854 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
SF1-211ENST00000448404 PPP1R11O60927 126 aaPredicted RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 PLCG1P19174 1290 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 CASP14P31944 242 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 ERCC6LQ2NKX8 1250 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 LZTFL1Q9NQ48 299 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 TFR2Q9UP52 801 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 PPP2R2CQ9Y2T4 447 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 ATP6V0A2Q9Y487 856 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 SLC37A4O43826 429 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 KRT31Q15323 416 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 GSDMAQ96QA5 445 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 GAKO14976 1311 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 A0A1B0GTH6 734 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 EDIL3O43854 480 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 FCER1AP12319 257 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 C15orf52Q6ZUT6 534 aaKnown RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 TRIML1Q8N9V2 468 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
SF1-211ENST00000448404 SCAF8Q9UPN6 1271 aaKnown RBP16.72■□□□□ 0.27
SF1-211ENST00000448404 POTEMA6NI47 508 aa16.71■□□□□ 0.27
SF1-211ENST00000448404 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
SF1-211ENST00000448404 ANKRD7Q92527 254 aa16.71■□□□□ 0.27
SF1-211ENST00000448404 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
SF1-211ENST00000448404 ADD3Q9UEY8 706 aaKnown RBP16.71■□□□□ 0.27
SF1-211ENST00000448404 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
SF1-211ENST00000448404 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
SF1-211ENST00000448404 ERCC5P28715 1186 aaPredicted RBP16.71■□□□□ 0.26
SF1-211ENST00000448404 TNNI2P48788 182 aa16.71■□□□□ 0.26
SF1-211ENST00000448404 SP8Q8IXZ3 490 aa16.71■□□□□ 0.26
SF1-211ENST00000448404 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.26
SF1-211ENST00000448404 DNAJC18Q9H819 358 aa16.71■□□□□ 0.26
SF1-211ENST00000448404 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.26
SF1-211ENST00000448404 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 N4BP3O15049 544 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 GTPBP6O43824 516 aaPredicted RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 URI1O94763 535 aaPredicted RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 BMP15O95972 392 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 TRAPPC10P48553 1259 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 SHMT1P34896 483 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 GNAQP50148 359 aa16.7■□□□□ 0.26
SF1-211ENST00000448404 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 GTPBP4Q9BZE4 634 aaKnown RBP16.7■□□□□ 0.26
SF1-211ENST00000448404 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 GDF11O95390 407 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 KLK7P49862 253 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 PAK1Q13153 545 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
SF1-211ENST00000448404 GLIS3Q8NEA6 775 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 ACRBPQ8NEB7 543 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 GYPCP04921 128 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 LONP1P36776 959 aaKnown RBP16.69■□□□□ 0.26
SF1-211ENST00000448404 GNG11P61952 73 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 GABPAQ06546 454 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■■ 28.9
SF1-211ENST00000448404 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
SF1-211ENST00000448404 CABP7Q86V35 215 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
SF1-211ENST00000448404 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.69■□□□□ 0.26
SF1-211ENST00000448404 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
SF1-211ENST00000448404 STK4Q13043 487 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 SLC30A10Q6XR72 485 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 ADGRF4Q8IZF3 695 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 REXO1Q8N1G1 1221 aaKnown RBP16.68■□□□□ 0.26
SF1-211ENST00000448404 MMTAG2Q9BU76 263 aaKnown RBP16.68■□□□□ 0.26
SF1-211ENST00000448404 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
SF1-211ENST00000448404 PSDA5PKW4 1024 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms