RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TXNRD3Q86VQ6 643 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 ZNF496Q96IT1 587 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 LBHD1Q9BQE6 289 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-205ENST00000447267 MYOZ2Q9NPC6 264 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 CD320Q9NPF0 282 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 SEPT3Q9UH03 358 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 GABRQQ9UN88 632 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
SDCBP-205ENST00000447267 ZSWIM8A7E2V4 1837 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 VIL1P09327 827 aaKnown RBP6.87□□□□□ -1.31
SDCBP-205ENST00000447267 EIF2AK2P19525 551 aaKnown RBP6.87□□□□□ -1.31
SDCBP-205ENST00000447267 HOXD10P28358 340 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 HLFQ16534 295 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 PCSK7Q16549 785 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 CLEC4GQ6UXB4 293 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 PRDM12Q9H4Q4 367 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 CPA4Q9UI42 421 aa6.87□□□□□ -1.31
SDCBP-205ENST00000447267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-205ENST00000447267 CCL15-CCL14A0A0B4J2E2 113 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 ADCY3O60266 1144 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 TLR2O60603 784 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 BRD2P25440 801 aaKnown RBP6.86□□□□□ -1.31
SDCBP-205ENST00000447267 ACAP1Q15027 740 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 CCL15Q16663 113 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 LRRC26Q2I0M4 334 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 PRSS36Q5K4E3 855 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 AKNAD1Q5T1N1 836 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 WFDC8Q8IUA0 241 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 SP8Q8IXZ3 490 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 PAK6Q9NQU5 681 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-205ENST00000447267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.31
SDCBP-205ENST00000447267 TRIM33Q9UPN9 1127 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 ATRXP46100 2492 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 CDH23Q9H251 3354 aa6.86□□□□□ -1.31
SDCBP-205ENST00000447267 PFASO15067 1338 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 TM4SF5O14894 197 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 NOS3P29474 1203 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 SOX18P35713 384 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 ZAP70P43403 619 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 DTWD1Q8N5C7 304 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 PBXIP1Q96AQ6 731 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 ELP3Q9H9T3 547 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 ZNF652Q9Y2D9 606 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
SDCBP-205ENST00000447267 ZNF646O15015 1829 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-205ENST00000447267 CYP2E1P05181 493 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-205ENST00000447267 PSAPP07602 524 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 ID4P47928 161 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 ATP11AP98196 1134 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 EIF4A2Q14240 407 aaKnown RBP6.84□□□□□ -1.31
SDCBP-205ENST00000447267 AMOTQ4VCS5 1084 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-205ENST00000447267 OR13H1Q8NG92 308 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 GPR152Q8TDT2 470 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 OPTNQ96CV9 577 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 C1orf115Q9H7X2 142 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 FAM86C1Q9NVL1 165 aa6.84□□□□□ -1.31
SDCBP-205ENST00000447267 ABCC4O15439 1325 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 RNMTO43148 476 aaKnown RBP6.83□□□□□ -1.32
SDCBP-205ENST00000447267 SASH1O94885 1247 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 H2AFB1P0C5Y9 115 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
SDCBP-205ENST00000447267 C17orf99Q6UX52 265 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 ATCAYQ86WG3 371 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 AEBP1Q8IUX7 1158 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 PRSS33Q8NF86 280 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDCBP-205ENST00000447267 KCNH6Q9H252 994 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 STIM2Q9P246 746 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 POLLQ9UGP5 575 aa6.83□□□□□ -1.32
SDCBP-205ENST00000447267 CFAP54Q96N23 3096 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 SCN7AQ01118 1682 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 BTBD19C9JJ37 291 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 WNT10BO00744 389 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
SDCBP-205ENST00000447267 ALX3O95076 343 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 ATP2B4P23634 1241 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 FLT3LGP49771 235 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 SETDB1Q15047 1291 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 GMLQ99445 158 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 MXD3Q9BW11 206 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 EPG5Q9HCE0 2579 aa6.82□□□□□ -1.32
SDCBP-205ENST00000447267 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 BBOX1O75936 387 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-205ENST00000447267 CAPN2P17655 700 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 GPTP24298 496 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
SDCBP-205ENST00000447267 AAK1Q2M2I8 961 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 SUSD4Q5VX71 490 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 TTC5Q8N0Z6 440 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms