RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RNF111Q6ZNA4 994 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 GTF2IRD2Q86UP8 949 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 ARHGEF4Q9NR80 690 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 IQCA1LA6NCM1 817 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 FAM153BP0C7A2 387 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 IFNGR1P15260 489 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 FUT4P22083 530 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZP2Q05996 745 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 SF1Q15637 639 aaKnown RBP6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 FOXB2Q5VYV0 432 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 POMZP3Q6PJE2 187 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 JAZF1Q86VZ6 243 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 LRRC47Q8N1G4 583 aaKnown RBP6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 PRDM7Q9NQW5 492 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 EBF1Q9UH73 591 aa6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 GPR55Q9Y2T6 319 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P6-201ENST00000444896 AGRPO00253 132 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 AURKAO14965 403 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 CD3EP07766 207 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 CEBPAP49715 358 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 IRAK1P51617 712 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 AMPD2Q01433 879 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 PLCL1Q15111 1095 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 RALGPS1Q5JS13 557 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 CRACR2BQ8N4Y2 399 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 ZBTB38Q8NAP3 1195 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 NKX2-4Q9H2Z4 354 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
HMGB3P6-201ENST00000444896 DNAJC25-GNG10A0A024R161 153 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 SSU72P8A0A1W2PR75 194 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 FKTNO75072 461 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 GSTM1P09488 218 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 HSP90AA2PQ14568 343 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 XP32Q5T750 250 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 TMEM52Q8NDY8 209 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 COPS5Q92905 334 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 AARSD1Q9BTE6 412 aaKnown RBP6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 G6PC3Q9BUM1 346 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 ADAMTS10Q9H324 1103 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 ADAMTS6Q9UKP5 1117 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
HMGB3P6-201ENST00000444896 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 TLDC2A0PJX2 215 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 STXBP3O00186 592 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 ARNTLO00327 626 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 SCG5P05408 212 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 RPL10P27635 214 aaKnown RBP6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 HOXC12P31275 282 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 GFRA1P56159 465 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 SQSTM1Q13501 440 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 LONRF2Q1L5Z9 754 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 C2orf27AQ580R0 203 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 THAP3Q8WTV1 239 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P6-201ENST00000444896 TRAV20A0A0B4J274 112 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 C2orf71A6NGG8 1288 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 DLX3O60479 287 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 FGFR1P11362 822 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 SCRN1Q12765 414 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 DENND5AQ6IQ26 1287 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 SLC23A3Q6PIS1 610 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 WAPLQ7Z5K2 1190 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 KREMEN2Q8NCW0 462 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 LINC01599Q8WXQ3 324 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 OSBP2Q969R2 916 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 C1orf159Q96HA4 380 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 EXOC2Q96KP1 924 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 ALPK1Q96QP1 1244 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 MRPL42Q9Y6G3 142 aaKnown RBP6.8□□□□□ -1.32
HMGB3P6-201ENST00000444896 PRODHO43272 600 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 ZGLP1P0C6A0 271 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 PABPC1P11940 636 aaKnown RBP6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 L1CAMP32004 1257 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 PRSS53Q2L4Q9 553 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 FAM209AQ5JX71 171 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 RCSD1Q6JBY9 416 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 TMEM145Q8NBT3 493 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 KISS1RQ969F8 398 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 CCDC140Q96MF4 163 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 SP110Q9HB58 689 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 ERVK13-1Q9NX77 482 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms