RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 KCNB2Q92953 911 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 RNF208Q9H0X6 261 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
ACTB-206ENST00000443528 REC8O95072 547 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 ICAM1P05362 532 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 PGK2P07205 417 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 PARP1P09874 1014 aaKnown RBP18.38■□□□□ 0.53
ACTB-206ENST00000443528 TAL1P17542 331 aaPredicted RBP18.38■□□□□ 0.53
ACTB-206ENST00000443528 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
ACTB-206ENST00000443528 HSPA4P34932 840 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 CACNB2Q08289 660 aaPredicted RBP18.38■□□□□ 0.53
ACTB-206ENST00000443528 KCTD2Q14681 263 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 CHST13Q8NET6 341 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
ACTB-206ENST00000443528 BRCA2P51587 3418 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 SH2B2O14492 632 aaPredicted RBP18.37■□□□□ 0.53
ACTB-206ENST00000443528 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
ACTB-206ENST00000443528 TROAPQ12815 778 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 TMEM87BQ96K49 555 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 PAK6Q9NQU5 681 aaPredicted RBP18.37■□□□□ 0.53
ACTB-206ENST00000443528 FBXO40Q9UH90 709 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
ACTB-206ENST00000443528 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 GJB1P08034 283 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 ALAS1P13196 640 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
ACTB-206ENST00000443528 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 OLFML2BQ68BL8 750 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 RBBP6Q7Z6E9 1792 aaKnown RBP18.36■□□□□ 0.53
ACTB-206ENST00000443528 ADGRF4Q8IZF3 695 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 RPTORQ8N122 1335 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 LRRC2Q9BYS8 371 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 ACAD9Q9H845 621 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 SLC5A4Q9NY91 659 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 SNX14Q9Y5W7 946 aa18.36■□□□□ 0.53
ACTB-206ENST00000443528 PALM3A6NDB9 673 aaPredicted RBP18.35■□□□□ 0.53
ACTB-206ENST00000443528 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
ACTB-206ENST00000443528 CYP2C19P33261 490 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 GJA8P48165 433 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 KRT32Q14532 448 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 GRM4Q14833 912 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 MFSD14CQ5VZR4 134 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 SHISA4Q96DD7 197 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
ACTB-206ENST00000443528 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.35■□□□□ 0.534e-14■■■□□ 15.2
ACTB-206ENST00000443528 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
ACTB-206ENST00000443528 DIS3Q9Y2L1 958 aaKnown RBP18.35■□□□□ 0.53
ACTB-206ENST00000443528 KLRF2D3W0D1 207 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 LIFRP42702 1097 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 ZNF654Q8IZM8 581 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 ANKRD35Q8N283 1001 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 JMJD4Q9H9V9 463 aa18.34■□□□□ 0.53
ACTB-206ENST00000443528 A1CFQ9NQ94 594 aaKnown RBP18.34■□□□□ 0.53
ACTB-206ENST00000443528 WDR19Q8NEZ3 1342 aa18.33■□□□□ 0.53
ACTB-206ENST00000443528 SGPL1O95470 568 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
ACTB-206ENST00000443528 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
ACTB-206ENST00000443528 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
ACTB-206ENST00000443528 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
ACTB-206ENST00000443528 FGD4Q96M96 766 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 TCEANC2Q96MN5 208 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 DEFB118Q96PH6 123 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
ACTB-206ENST00000443528 ZNFX1Q9P2E3 1918 aaKnown RBP18.33■□□□□ 0.52
ACTB-206ENST00000443528 CYBAP13498 195 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 CPA1P15085 419 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 NFXL1Q6ZNB6 911 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 MTMR8Q96EF0 704 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
ACTB-206ENST00000443528 KIAA0100Q14667 2235 aaKnown RBP18.32■□□□□ 0.52
ACTB-206ENST00000443528 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 NFIBO00712 420 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 DDAH1O94760 285 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 QRICH1Q2TAL8 776 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 SGMS1Q86VZ5 419 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
ACTB-206ENST00000443528 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 CRISPLD2Q9H0B8 497 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
ACTB-206ENST00000443528 PNMA2Q9UL42 364 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms