RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CTDSPL2Q05D32 466 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 RCSD1Q6JBY9 416 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 CCDC129Q6ZRS4 1044 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 KLHDC9Q8NEP7 349 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 LENG1Q96BZ8 264 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-219ENST00000440240 ACAD9Q9H845 621 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 SPC25Q9HBM1 224 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 STARD7Q9NQZ5 370 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 HELLSQ9NRZ9 838 aa24.58■■□□□ 1.53
CPNE1-219ENST00000440240 FOXP2O15409 715 aa24.57■■□□□ 1.52
CPNE1-219ENST00000440240 HDAC1Q13547 482 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-219ENST00000440240 KCNA10Q16322 511 aa24.57■■□□□ 1.52
CPNE1-219ENST00000440240 TKFCQ3LXA3 575 aa24.57■■□□□ 1.52
CPNE1-219ENST00000440240 TOX2Q96NM4 488 aa24.57■■□□□ 1.52
CPNE1-219ENST00000440240 HOMER2Q9NSB8 354 aa24.57■■□□□ 1.52
CPNE1-219ENST00000440240 KIAA0355O15063 1070 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 RANBP6O60518 1105 aaKnown RBP24.56■■□□□ 1.52
CPNE1-219ENST00000440240 PQBP1O60828 265 aaKnown RBP24.56■■□□□ 1.52
CPNE1-219ENST00000440240 PDE1AP54750 535 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 ALX1Q15699 326 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 CCDC144BQ3MJ40 725 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 CCSAPQ6IQ19 270 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-219ENST00000440240 ANKRD33Q7Z3H0 272 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 PCSK9Q8NBP7 692 aaKnown RBP24.56■■□□□ 1.52
CPNE1-219ENST00000440240 CRBNQ96SW2 442 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 IL17RBQ9NRM6 502 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 TMEM39AQ9NV64 488 aa24.56■■□□□ 1.52
CPNE1-219ENST00000440240 DCDC2CA8MYV0 355 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 ORC4O43929 436 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 RAG1P15918 1043 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 CST5P28325 142 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-219ENST00000440240 C9orf50Q5SZB4 431 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 VPS53Q5VIR6 699 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 ARMCX2Q7L311 632 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 FGD4Q96M96 766 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 AGBL1Q96MI9 1066 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 GLT1D1Q96MS3 346 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 INCENPQ9NQS7 918 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 RNF146Q9NTX7 359 aa24.55■■□□□ 1.52
CPNE1-219ENST00000440240 C6orf222P0C671 652 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-219ENST00000440240 KCTD1Q719H9 257 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 CCDC144CPQ8IYA2 1237 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 FAM133AQ8N9E0 248 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 TRERF1Q96PN7 1200 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 ZNF536O15090 1300 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 ELP1O95163 1332 aa24.54■■□□□ 1.52
CPNE1-219ENST00000440240 NMT2O60551 498 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 FGRP09769 529 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 ITGB8P26012 769 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 NOVP48745 357 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 GJA9P57773 515 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 CNTN2Q02246 1040 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 MCMDC2Q4G0Z9 681 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 ZNF697Q5TEC3 545 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 CHMP4CQ96CF2 233 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 A1CFQ9NQ94 594 aaKnown RBP24.53■■□□□ 1.52
CPNE1-219ENST00000440240 LTBP2Q14767 1821 aa24.53■■□□□ 1.52
CPNE1-219ENST00000440240 ASB14A6NK59 587 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 DLL1O00548 723 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 ALAS1P13196 640 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 FAAP100Q0VG06 881 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 AAMPQ13685 434 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 GNASQ5JWF2 1037 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 UPF3AQ9H1J1 476 aaKnown RBP24.52■■□□□ 1.52
CPNE1-219ENST00000440240 PRR12Q9ULL5 1215 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 MROH7Q68CQ1 1323 aa24.52■■□□□ 1.52
CPNE1-219ENST00000440240 FGAP02671 866 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 ASGR1P07306 291 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 SMAD3P84022 425 aaKnown RBP24.51■■□□□ 1.51
CPNE1-219ENST00000440240 DCAF4Q8WV16 495 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 VTI1AQ96AJ9 217 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 KATNBL1Q9H079 304 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 TOMM22Q9NS69 142 aa24.51■■□□□ 1.51
CPNE1-219ENST00000440240 MYADML2A6NDP7 307 aa24.5■■□□□ 1.51
CPNE1-219ENST00000440240 CCDC174Q6PII3 467 aa24.5■■□□□ 1.51
CPNE1-219ENST00000440240 FAM227BQ96M60 508 aa24.5■■□□□ 1.51
CPNE1-219ENST00000440240 FAM161BQ96MY7 647 aa24.5■■□□□ 1.51
CPNE1-219ENST00000440240 SOWAHBA6NEL2 793 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 ADCY6O43306 1168 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 CDK7P50613 346 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 NKX3-2P78367 333 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 TNFAIP2Q03169 654 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 FPGSQ05932 587 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 GUCD1Q96NT3 240 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 TCP11L1Q9NUJ3 509 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 MTMR7Q9Y216 660 aa24.49■■□□□ 1.51
CPNE1-219ENST00000440240 TIMP1P01033 207 aa24.48■■□□□ 1.51
CPNE1-219ENST00000440240 TOP1P11387 765 aaKnown RBP24.48■■□□□ 1.51
CPNE1-219ENST00000440240 CCDC96Q2M329 555 aa24.48■■□□□ 1.51
CPNE1-219ENST00000440240 NOL8Q76FK4 1167 aaKnown RBP24.48■■□□□ 1.51
CPNE1-219ENST00000440240 RNPC3Q96LT9 517 aaKnown RBP24.48■■□□□ 1.51
CPNE1-219ENST00000440240 CYP39A1Q9NYL5 469 aa24.48■■□□□ 1.51
CPNE1-219ENST00000440240 CCPG1Q9ULG6 757 aa24.48■■□□□ 1.51
CPNE1-219ENST00000440240 CUL9Q8IWT3 2517 aa24.48■■□□□ 1.51
CPNE1-219ENST00000440240 A0A0D9SFI3 127 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 A0A0U1RQG5 324 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-219ENST00000440240 TRIM6-TRIM34B2RNG4 842 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 ARVCFO00192 962 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 ICAM1P05362 532 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 HSPD1P10809 573 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms