RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 USP5P45974 858 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 RAD51AP2Q09MP3 1159 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
ERCC3-202ENST00000426778 MKNK2Q9HBH9 465 aa16.15■□□□□ 0.18
ERCC3-202ENST00000426778 LRRC10BA6NIK2 292 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 ANKRD65E5RJM6 399 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 TRIM21P19474 475 aaKnown RBP16.14■□□□□ 0.17
ERCC3-202ENST00000426778 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-202ENST00000426778 CASP8Q14790 479 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 TAF3Q5VWG9 929 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 ADSSL1Q8N142 457 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 SH3RF3Q8TEJ3 882 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-202ENST00000426778 L1RE1Q9UN81 338 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 SEMA3EO15041 775 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 ATP8B1O43520 1251 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 FAM193AP78312 1265 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-202ENST00000426778 KIAA1328Q86T90 577 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 ITIH6Q6UXX5 1313 aa16.14■□□□□ 0.17
ERCC3-202ENST00000426778 STK4Q13043 487 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 FAM182BQ5T319 152 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 HDXQ7Z353 690 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 CSGALNACT2Q8N6G5 542 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 OR8K1Q8NGG5 319 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 KLRC4O43908 158 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 FGRP09769 529 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 PLCG1P19174 1290 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
ERCC3-202ENST00000426778 AMPD2Q01433 879 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
ERCC3-202ENST00000426778 TRIM66O15016 1216 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 CCNT1O60563 726 aaKnown RBP16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 FBXO33Q7Z6M2 555 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 MSANTD4Q8NCY6 345 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 CCDC51Q96ER9 411 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 ORC4O43929 436 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TECP42680 631 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 SPAG1Q07617 926 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 PDE4DQ08499 809 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TUBGCP2Q9BSJ2 902 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 A0A1B0GUL6 1792 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 KIF5BP33176 963 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 LONP1P36776 959 aaKnown RBP16.12■□□□□ 0.17
ERCC3-202ENST00000426778 ASIC1P78348 528 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 GPS2Q13227 327 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 ANKRD40Q6AI12 368 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 TXLNBQ8N3L3 684 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 RMND1Q9NWS8 449 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 RAB21Q9UL25 225 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 ZNF652Q9Y2D9 606 aa16.12■□□□□ 0.17
ERCC3-202ENST00000426778 MYH10P35580 1976 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 RASSF10A6NK89 507 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 LGALS16A8MUM7 142 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 TBC1D8BQ0IIM8 1120 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 KCTD19Q17RG1 926 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 USP17L2Q6R6M4 530 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 GJA10Q969M2 543 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 SLC39A2Q9NP94 309 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 MAGEC2Q9UBF1 373 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 H7C1D1 291 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 ERLIN1O75477 346 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 MYBL2P10244 700 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 MTIF2P46199 727 aaKnown RBP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 DUSP9Q99956 384 aaKnown RBP16.11■□□□□ 0.17
ERCC3-202ENST00000426778 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
ERCC3-202ENST00000426778 PDE2AO00408 941 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 RABEP2Q9H5N1 569 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 TMEM51Q9NW97 253 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 PSMA7O14818 248 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 FECHP22830 423 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 CXCR5P32302 372 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 DNA2P51530 1060 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 WHAMMP3Q1A5X7 153 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms