RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 SNAP25P60880 206 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 CCDC174Q6PII3 467 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 MMP19Q99542 508 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 MAP3K14Q99558 947 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 MAD2L2Q9UI95 211 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 PNMA2Q9UL42 364 aa27.41■■□□□ 1.98
PDGFA-205ENST00000426681 DDAH1O94760 285 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 KCTD2Q14681 263 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 SGMS1Q86VZ5 419 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 STAG2Q8N3U4 1231 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 TRIB2Q92519 343 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 UBA5Q9GZZ9 404 aa27.4■■□□□ 1.98
PDGFA-205ENST00000426681 BIN2Q9UBW5 565 aaPredicted RBP27.4■■□□□ 1.98
PDGFA-205ENST00000426681 KLRF2D3W0D1 207 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 COBLO75128 1261 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 HMGCRP04035 888 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 UBXN2AP68543 259 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 DPP9Q86TI2 863 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 ZNF654Q8IZM8 581 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 JAKMIP1Q96N16 626 aaKnown RBP27.39■■□□□ 1.98
PDGFA-205ENST00000426681 CPVLQ9H3G5 476 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 SLC5A4Q9NY91 659 aa27.39■■□□□ 1.98
PDGFA-205ENST00000426681 INHAP05111 366 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 SLC4A3P48751 1232 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 ADGRF4Q8IZF3 695 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 NPLOC4Q8TAT6 608 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 LRRC2Q9BYS8 371 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 CCPG1Q9ULG6 757 aa27.38■■□□□ 1.97
PDGFA-205ENST00000426681 CCDC69A6NI79 296 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 IGHA2P01877 340 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 PSMA5P28066 241 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 CCL14Q16627 93 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 NFXL1Q6ZNB6 911 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 RNF146Q9NTX7 359 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 DIS3Q9Y2L1 958 aaKnown RBP27.37■■□□□ 1.97
PDGFA-205ENST00000426681 CENPFP49454 3210 aa27.37■■□□□ 1.97
PDGFA-205ENST00000426681 SMCHD1A6NHR9 2005 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 BLOC1S2Q6QNY1 142 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 TRERF1Q96PN7 1200 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 ACAD9Q9H845 621 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 JMJD4Q9H9V9 463 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 SLC12A7Q9Y666 1083 aa27.36■■□□□ 1.97
PDGFA-205ENST00000426681 DNAJC25-GNG10A0A024R161 153 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 CAPN15O75808 1086 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 CALM1P0DP23 149 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 CALM2P0DP24 149 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 CALM3P0DP25 149 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 ALAS1P13196 640 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 MTFR1Q15390 333 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 MAP3K21Q5TCX8 1036 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 OLFML2BQ68BL8 750 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 NUP133Q8WUM0 1156 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 TCEANC2Q96MN5 208 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 HOMER2Q9NSB8 354 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 FLRT1Q9NZU1 646 aa27.35■■□□□ 1.97
PDGFA-205ENST00000426681 KIAA0100Q14667 2235 aaKnown RBP27.35■■□□□ 1.97
PDGFA-205ENST00000426681 PGK2P07205 417 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 CCL5P13501 91 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 KIF5BP33176 963 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 CDC37Q16543 378 aaPredicted RBP27.34■■□□□ 1.97
PDGFA-205ENST00000426681 ZNF792Q3KQV3 632 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 FBXL16Q8N461 479 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 MTMR8Q96EF0 704 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 DDX11Q96FC9 970 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 MYL10Q9BUA6 226 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 TMEM106CQ9BVX2 250 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 TM6SF1Q9BZW5 370 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 RIOX1Q9H6W3 641 aa27.34■■□□□ 1.97
PDGFA-205ENST00000426681 RBBP6Q7Z6E9 1792 aaKnown RBP27.34■■□□□ 1.97
PDGFA-205ENST00000426681 RPS6KB1P23443 525 aa27.33■■□□□ 1.97
PDGFA-205ENST00000426681 TRIM32Q13049 653 aa27.33■■□□□ 1.97
PDGFA-205ENST00000426681 ANKRD35Q8N283 1001 aa27.33■■□□□ 1.97
PDGFA-205ENST00000426681 CTCFLQ8NI51 663 aaPredicted RBP27.33■■□□□ 1.97
PDGFA-205ENST00000426681 ZSWIM6Q9HCJ5 1215 aa27.33■■□□□ 1.97
PDGFA-205ENST00000426681 PLXNA1Q9UIW2 1896 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 DHX16O60231 1041 aaKnown RBP27.32■■□□□ 1.96
PDGFA-205ENST00000426681 MYCP01106 439 aaPredicted RBP27.32■■□□□ 1.96
PDGFA-205ENST00000426681 CPA1P15085 419 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 CASTP20810 708 aaKnown RBP27.32■■□□□ 1.96
PDGFA-205ENST00000426681 SMARCA1P28370 1054 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 SLC35G1Q2M3R5 365 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 MUM1L1Q5H9M0 696 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 MFSD14CQ5VZR4 134 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 MAML3Q96JK9 1138 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 LZTS2Q9BRK4 669 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 UNC93B1Q9H1C4 597 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 VAT1LQ9HCJ6 419 aa27.32■■□□□ 1.96
PDGFA-205ENST00000426681 GNAQP50148 359 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 QRICH1Q2TAL8 776 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 APOA5Q6Q788 366 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 SYNE3Q6ZMZ3 975 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 RNF208Q9H0X6 261 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 A1CFQ9NQ94 594 aaKnown RBP27.31■■□□□ 1.96
PDGFA-205ENST00000426681 GTF3C3Q9Y5Q9 886 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 PFASO15067 1338 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 RPTORQ8N122 1335 aa27.31■■□□□ 1.96
PDGFA-205ENST00000426681 MYH6P13533 1939 aa27.3■■□□□ 1.96
PDGFA-205ENST00000426681 CYTH3O43739 400 aa27.3■■□□□ 1.96
PDGFA-205ENST00000426681 SEC24BO95487 1268 aa27.3■■□□□ 1.96
PDGFA-205ENST00000426681 PRKAR2AP13861 404 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms