RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 AAMPQ13685 434 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 ABHD16BQ9H3Z7 469 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 ACAD9Q9H845 621 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 INCENPQ9NQS7 918 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 HOMER2Q9NSB8 354 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.01■□□□□ 0.95
GPC1-203ENST00000425056 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
GPC1-203ENST00000425056 TRIM43BA6NCK2 446 aa21■□□□□ 0.95
GPC1-203ENST00000425056 DUSP11O75319 330 aaKnown RBP21■□□□□ 0.95
GPC1-203ENST00000425056 TLE2Q04725 743 aa21■□□□□ 0.95
GPC1-203ENST00000425056 IKQ13123 557 aaPredicted RBP21■□□□□ 0.95
GPC1-203ENST00000425056 ACVR2BQ13705 512 aa21■□□□□ 0.95
GPC1-203ENST00000425056 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
GPC1-203ENST00000425056 KLHDC9Q8NEP7 349 aa21■□□□□ 0.95
GPC1-203ENST00000425056 TRIM43Q96BQ3 446 aaPredicted RBP21■□□□□ 0.95
GPC1-203ENST00000425056 FAM227BQ96M60 508 aa21■□□□□ 0.95
GPC1-203ENST00000425056 MTMR10Q9NXD2 777 aa21■□□□□ 0.95
GPC1-203ENST00000425056 MOXD2PA6NHM9 499 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 RANBP6O60518 1105 aaKnown RBP20.99■□□□□ 0.95
GPC1-203ENST00000425056 CST5P28325 142 aaPredicted RBP20.99■□□□□ 0.95
GPC1-203ENST00000425056 ACLYP53396 1101 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 TKFCQ3LXA3 575 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 MCMDC2Q4G0Z9 681 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 CCSAPQ6IQ19 270 aaPredicted RBP20.99■□□□□ 0.95
GPC1-203ENST00000425056 RCSD1Q6JBY9 416 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 ARMCX2Q7L311 632 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 RASGRP2Q7LDG7 609 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 FAM133AQ8N9E0 248 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 BADQ92934 168 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 A1CFQ9NQ94 594 aaKnown RBP20.99■□□□□ 0.95
GPC1-203ENST00000425056 RNF146Q9NTX7 359 aa20.99■□□□□ 0.95
GPC1-203ENST00000425056 LCTP09848 1927 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 ADCY6O43306 1168 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 CLTBP09497 229 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 KCTD1Q719H9 257 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 AGBL1Q96MI9 1066 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 LNPKQ9C0E8 428 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
GPC1-203ENST00000425056 FGAP02671 866 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 CNTN2Q02246 1040 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 CCDC144BQ3MJ40 725 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 FAM109BQ6ICB4 259 aaPredicted RBP20.97■□□□□ 0.95
GPC1-203ENST00000425056 ANKRD33Q7Z3H0 272 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 ZNF589Q86UQ0 364 aaPredicted RBP20.97■□□□□ 0.95
GPC1-203ENST00000425056 CCDC144CPQ8IYA2 1237 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 CHMP4CQ96CF2 233 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 UPF3AQ9H1J1 476 aaKnown RBP20.97■□□□□ 0.95
GPC1-203ENST00000425056 STARD7Q9NQZ5 370 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 PRR12Q9ULL5 1215 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 STXBP5LQ9Y2K9 1186 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 LAMA4Q16363 1823 aa20.97■□□□□ 0.95
GPC1-203ENST00000425056 MYADML2A6NDP7 307 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 POTEB2H3BUK9 544 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 KIAA0355O15063 1070 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 PQBP1O60828 265 aaKnown RBP20.96■□□□□ 0.95
GPC1-203ENST00000425056 HSPD1P10809 573 aaKnown RBP20.96■□□□□ 0.95
GPC1-203ENST00000425056 NMIQ13287 307 aaPredicted RBP20.96■□□□□ 0.95
GPC1-203ENST00000425056 SHHQ15465 462 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 KCNA10Q16322 511 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 DCAF4Q8WV16 495 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 TOX2Q96NM4 488 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 CCDC171Q6TFL3 1326 aa20.96■□□□□ 0.95
GPC1-203ENST00000425056 ALAS1P13196 640 aa20.95■□□□□ 0.94
GPC1-203ENST00000425056 ITGB8P26012 769 aa20.95■□□□□ 0.94
GPC1-203ENST00000425056 GJA9P57773 515 aa20.95■□□□□ 0.94
GPC1-203ENST00000425056 C9orf50Q5SZB4 431 aa20.95■□□□□ 0.94
GPC1-203ENST00000425056 TRERF1Q96PN7 1200 aa20.95■□□□□ 0.94
GPC1-203ENST00000425056 SOWAHBA6NEL2 793 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 C6orf222P0C671 652 aaPredicted RBP20.94■□□□□ 0.94
GPC1-203ENST00000425056 NKX3-2P78367 333 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 CCDC96Q2M329 555 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 CCDC174Q6PII3 467 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 PCSK9Q8NBP7 692 aaKnown RBP20.94■□□□□ 0.94
GPC1-203ENST00000425056 SPC25Q9HBM1 224 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 TOMM22Q9NS69 142 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 TCP11L1Q9NUJ3 509 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 ASTN1O14525 1302 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 ELP1O95163 1332 aa20.94■□□□□ 0.94
GPC1-203ENST00000425056 ASB14A6NK59 587 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 TRIM6-TRIM34B2RNG4 842 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 ICAM1P05362 532 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 TOP1P11387 765 aaKnown RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 PCP11498 1178 aaKnown RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 SNAP25P60880 206 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 IRX5P78411 483 aaPredicted RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 FAAP100Q0VG06 881 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 MUM1L1Q5H9M0 696 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 RRP12Q5JTH9 1297 aaKnown RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 BTNL9Q6UXG8 535 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 SLC17A8Q8NDX2 589 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 GLT1D1Q96MS3 346 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 RANBP17Q9H2T7 1088 aaKnown RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 RWDD1Q9H446 243 aaPredicted RBP20.93■□□□□ 0.94
GPC1-203ENST00000425056 CYP39A1Q9NYL5 469 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 MTMR7Q9Y216 660 aa20.93■□□□□ 0.94
GPC1-203ENST00000425056 DCDC2CA8MYV0 355 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 ASGR1P07306 291 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms