RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RASGRP2Q7LDG7 609 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 RNF180Q86T96 592 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 DCAF4Q8WV16 495 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 GDF15Q99988 308 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 UBE2OQ9C0C9 1292 aaKnown RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 PRO3102Q9H379 93 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 ACAD9Q9H845 621 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 PRKAG2Q9UGJ0 569 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 DOCK3Q8IZD9 2030 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 CENPFP49454 3210 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 DNAJC25-GNG10A0A024R161 153 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 PLA2G6O60733 806 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 SNAI1O95863 264 aaPredicted RBP10.94□□□□□ -0.66
NUP50-206ENST00000422489 RTP1P59025 263 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 TKFCQ3LXA3 575 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 POTEHQ6S545 545 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 MSL3Q8N5Y2 521 aaKnown RBP10.94□□□□□ -0.66
NUP50-206ENST00000422489 ESR2Q92731 530 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 TTC14Q96N46 770 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
NUP50-206ENST00000422489 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
NUP50-206ENST00000422489 CCPG1Q9ULG6 757 aa10.94□□□□□ -0.66
NUP50-206ENST00000422489 ZNF536O15090 1300 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 PDE4AP27815 886 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 BMP8BP34820 402 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 NOVP48745 357 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 SYDE2Q5VT97 1194 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 NSMFQ6X4W1 530 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 NOL8Q76FK4 1167 aaKnown RBP10.93□□□□□ -0.66
NUP50-206ENST00000422489 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
NUP50-206ENST00000422489 PRDM5Q9NQX1 630 aaPredicted RBP10.93□□□□□ -0.66
NUP50-206ENST00000422489 CTNNA3Q9UI47 895 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 MYH7P12883 1935 aa10.93□□□□□ -0.66
NUP50-206ENST00000422489 ZMYM6O95789 1325 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 SYNGAP1Q96PV0 1343 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 A0A1W2PPC1 479 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 KDM4AO75164 1064 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 PCP11498 1178 aaKnown RBP10.92□□□□□ -0.66
NUP50-206ENST00000422489 IMMTQ16891 758 aaKnown RBP10.92□□□□□ -0.66
NUP50-206ENST00000422489 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 MUM1L1Q5H9M0 696 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 ARMCX2Q7L311 632 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
NUP50-206ENST00000422489 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 SPC25Q9HBM1 224 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 A1CFQ9NQ94 594 aaKnown RBP10.92□□□□□ -0.66
NUP50-206ENST00000422489 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
NUP50-206ENST00000422489 B4E1Z4 1266 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 ICAM1P05362 532 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
NUP50-206ENST00000422489 GOLGA8HP0CJ92 632 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 TLE2Q04725 743 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 KCNA10Q16322 511 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 CCDC178Q5BJE1 867 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 TTC22Q5TAA0 569 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 BTNL9Q6UXG8 535 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 DGKHQ86XP1 1220 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 UBA5Q9GZZ9 404 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 RANBP17Q9H2T7 1088 aaKnown RBP10.91□□□□□ -0.66
NUP50-206ENST00000422489 ABHD16BQ9H3Z7 469 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
NUP50-206ENST00000422489 NEDD4P46934 1319 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 RLFQ13129 1914 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 ASB14A6NK59 587 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 SOX1O00570 391 aaPredicted RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 DUSP11O75319 330 aaKnown RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 PDHBP11177 359 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 ACLYP53396 1101 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 TNFAIP2Q03169 654 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 BAATQ14032 418 aaPredicted RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 GNASQ5JWF2 1037 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
NUP50-206ENST00000422489 EEPD1Q7L9B9 569 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 TDHQ8IZJ6 230 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 RUFY2Q8WXA3 655 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 FGD4Q96M96 766 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 PURBQ96QR8 312 aaKnown RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 ZSCAN10Q96SZ4 725 aaPredicted RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 KRT23Q9C075 422 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 CYP39A1Q9NYL5 469 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms